RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 OPN5Q6U736 354 aa17.51■□□□□ 0.39
CKS1B-203ENST00000368439 Q6ZPB1 254 aaPredicted RBP17.51■□□□□ 0.39
CKS1B-203ENST00000368439 RTL4Q6ZR62 310 aa17.51■□□□□ 0.39
CKS1B-203ENST00000368439 FGD2Q7Z6J4 655 aa17.51■□□□□ 0.39
CKS1B-203ENST00000368439 FJX1Q86VR8 437 aa17.51■□□□□ 0.39
CKS1B-203ENST00000368439 C10orf107Q8IVU9 208 aa17.51■□□□□ 0.39
CKS1B-203ENST00000368439 GALNT12Q8IXK2 581 aa17.51■□□□□ 0.39
CKS1B-203ENST00000368439 MREGQ8N565 214 aa17.51■□□□□ 0.39
CKS1B-203ENST00000368439 ZNF615Q8N8J6 731 aa17.51■□□□□ 0.39
CKS1B-203ENST00000368439 GOLM1Q8NBJ4 401 aa17.51■□□□□ 0.39
CKS1B-203ENST00000368439 APOPT1Q96IL0 206 aa17.51■□□□□ 0.39
CKS1B-203ENST00000368439 ZNF681Q96N22 645 aa17.51■□□□□ 0.39
CKS1B-203ENST00000368439 ROPN1BQ9BZX4 212 aaPredicted RBP17.51■□□□□ 0.39
CKS1B-203ENST00000368439 WWTR1Q9GZV5 400 aa17.51■□□□□ 0.39
CKS1B-203ENST00000368439 ROPN1Q9HAT0 212 aaPredicted RBP17.51■□□□□ 0.39
CKS1B-203ENST00000368439 H3BQF6 201 aa17.5■□□□□ 0.39
CKS1B-203ENST00000368439 PCDH7O60245 1069 aa17.5■□□□□ 0.39
CKS1B-203ENST00000368439 SLC19A2O60779 497 aa17.5■□□□□ 0.39
CKS1B-203ENST00000368439 HSF1Q00613 529 aa17.5■□□□□ 0.39
CKS1B-203ENST00000368439 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.5■□□□□ 0.39
CKS1B-203ENST00000368439 PRICKLE4Q2TBC4 344 aa17.5■□□□□ 0.39
CKS1B-203ENST00000368439 SPIN4Q56A73 249 aa17.5■□□□□ 0.39
CKS1B-203ENST00000368439 HIST2H2BCQ6DN03 193 aa17.5■□□□□ 0.39
CKS1B-203ENST00000368439 SLC29A4Q7RTT9 530 aa17.5■□□□□ 0.39
CKS1B-203ENST00000368439 SLC15A4Q8N697 577 aa17.5■□□□□ 0.39
CKS1B-203ENST00000368439 CCDC63Q8NA47 563 aa17.5■□□□□ 0.39
CKS1B-203ENST00000368439 OR2M7Q8NG81 312 aa17.5■□□□□ 0.39
CKS1B-203ENST00000368439 CNRIP1Q96F85 164 aaPredicted RBP17.5■□□□□ 0.39
CKS1B-203ENST00000368439 SGCZQ96LD1 299 aa17.5■□□□□ 0.39
CKS1B-203ENST00000368439 PARD6BQ9BYG5 372 aa17.5■□□□□ 0.39
CKS1B-203ENST00000368439 ZNF407Q9C0G0 2248 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 NCOA6Q14686 2063 aaPredicted RBP17.49■□□□□ 0.39
CKS1B-203ENST00000368439 TRGV8A0A0C4DH27 118 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 A1L4Q6 167 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 CCDC151A5D8V7 595 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 ZNHIT1O43257 154 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 ATP1B1P05026 303 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 IL3P08700 152 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 CCL3P10147 92 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 CNR1P21554 472 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 SERPINB3P29508 390 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 TIA1P31483 386 aaKnown RBP eCLIP17.49■□□□□ 0.392e-18■■□□□ 13.7
CKS1B-203ENST00000368439 PTGER1P34995 402 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 FEN1P39748 380 aaKnown RBP17.49■□□□□ 0.39
CKS1B-203ENST00000368439 RBPJQ06330 500 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 C3AR1Q16581 482 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 CMPK2Q5EBM0 449 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 FAM180BQ6P0A1 224 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 BNC2Q6ZN30 1099 aaPredicted RBP17.49■□□□□ 0.39
CKS1B-203ENST00000368439 TRIM46Q7Z4K8 759 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 SPPL2CQ8IUH8 684 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 SLC22A8Q8TCC7 542 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 ADIPOR1Q96A54 375 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 CTHRC1Q96CG8 243 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 GAL3ST4Q96RP7 486 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 TMEM109Q9BVC6 243 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 FAIM2Q9BWQ8 316 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 GATA5Q9BWX5 397 aaPredicted RBP17.49■□□□□ 0.39
CKS1B-203ENST00000368439 OR10A5Q9H207 317 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 MAT2BQ9NZL9 334 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 SLC17A7Q9P2U7 560 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 ZNF639Q9UID6 485 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 RAB21Q9UL25 225 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 DLGAP4Q9Y2H0 992 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 CCL27Q9Y4X3 112 aa17.49■□□□□ 0.39
CKS1B-203ENST00000368439 PCNX1Q96RV3 2341 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 GOLGA6L10A6NI86 522 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 G3V3Y1 287 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 HS6ST1O60243 411 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 ZG16O60844 167 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 ERAL1O75616 437 aaKnown RBP17.48■□□□□ 0.39
CKS1B-203ENST00000368439 GLSO94925 669 aaPredicted RBP17.48■□□□□ 0.39
CKS1B-203ENST00000368439 FBXO45P0C2W1 286 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 CREB1P16220 341 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 CSNK2A2P19784 350 aaPredicted RBP17.48■□□□□ 0.39
CKS1B-203ENST00000368439 NT5EP21589 574 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 NR0B1P51843 470 aaKnown RBP17.48■□□□□ 0.39
CKS1B-203ENST00000368439 PER3P56645 1201 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 ACSM2AQ08AH3 577 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 IFFO1Q0D2I5 559 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 MAP4K2Q12851 820 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 DUSP8Q13202 625 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 CFAP157Q5JU67 520 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 ACSM2BQ68CK6 577 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 FAM111BQ6SJ93 734 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 SRRM1Q8IYB3 904 aaKnown RBP17.48■□□□□ 0.39
CKS1B-203ENST00000368439 GHDCQ8N2G8 530 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 OR7G1Q8NGA0 311 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 OR52N2Q8NGI0 321 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 PAQR8Q8TEZ7 354 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 C16orf78Q8WTQ4 265 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 TP53INP1Q96A56 240 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 KLHL29Q96CT2 875 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 SPACA9Q96E40 222 aaPredicted RBP17.48■□□□□ 0.39
CKS1B-203ENST00000368439 SHCBP1LQ9BZQ2 653 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 PLSCR2Q9NRY7 297 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 RYDENQ9NUL5 291 aaKnown RBP17.48■□□□□ 0.39
CKS1B-203ENST00000368439 MID2Q9UJV3 735 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 NCKAP5O14513 1909 aa17.48■□□□□ 0.39
CKS1B-203ENST00000368439 NINQ8N4C6 2090 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms