RNA–Protein interactions for RNA: ENST00000368277.3

PMF1-202, Transcript of polyamine modulated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMF1, Length 1,068 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-202ENST00000368277 ULK2Q8IYT8 1036 aa12.42□□□□□ -0.42
PMF1-202ENST00000368277 LRRC25Q8N386 305 aaPredicted RBP12.42□□□□□ -0.42
PMF1-202ENST00000368277 ZNF441Q8N8Z8 693 aa12.42□□□□□ -0.42
PMF1-202ENST00000368277 DIO2Q92813 273 aa12.42□□□□□ -0.42
PMF1-202ENST00000368277 PHF21BQ96EK2 531 aa12.42□□□□□ -0.42
PMF1-202ENST00000368277 ART5Q96L15 291 aa12.42□□□□□ -0.42
PMF1-202ENST00000368277 CENPKQ9BS16 269 aa12.42□□□□□ -0.42
PMF1-202ENST00000368277 DOHHQ9BU89 302 aa12.42□□□□□ -0.42
PMF1-202ENST00000368277 RAB17Q9H0T7 212 aa12.42□□□□□ -0.42
PMF1-202ENST00000368277 NOL11Q9H8H0 719 aaKnown RBP12.42□□□□□ -0.42
PMF1-202ENST00000368277 DDX31Q9H8H2 851 aaKnown RBP12.42□□□□□ -0.42
PMF1-202ENST00000368277 LYARQ9NX58 379 aaKnown RBP12.42□□□□□ -0.42
PMF1-202ENST00000368277 MS4A12Q9NXJ0 267 aa12.42□□□□□ -0.42
PMF1-202ENST00000368277 NINJ2Q9NZG7 142 aa12.42□□□□□ -0.42
PMF1-202ENST00000368277 DTX4Q9Y2E6 619 aa12.42□□□□□ -0.42
PMF1-202ENST00000368277 SLC6A5Q9Y345 797 aa12.42□□□□□ -0.42
PMF1-202ENST00000368277 PCDHGA11Q9Y5H2 935 aa12.42□□□□□ -0.42
PMF1-202ENST00000368277 MTORP42345 2549 aa12.42□□□□□ -0.42
PMF1-202ENST00000368277 C15orf38-AP3S2A0A0A6YYH1 394 aa12.41□□□□□ -0.42
PMF1-202ENST00000368277 A0A1B0GTL3 188 aa12.41□□□□□ -0.42
PMF1-202ENST00000368277 H0YIV9 168 aa12.41□□□□□ -0.42
PMF1-202ENST00000368277 HCN1O60741 890 aa12.41□□□□□ -0.42
PMF1-202ENST00000368277 KLHL2O95198 593 aa12.41□□□□□ -0.42
PMF1-202ENST00000368277 ZWINTO95229 277 aa12.41□□□□□ -0.42
PMF1-202ENST00000368277 TSPAN8P19075 237 aa12.41□□□□□ -0.42
PMF1-202ENST00000368277 PTX3P26022 381 aaPredicted RBP12.41□□□□□ -0.42
PMF1-202ENST00000368277 DNAJA1P31689 397 aaKnown RBP12.41□□□□□ -0.42
PMF1-202ENST00000368277 PHEXP78562 749 aa12.41□□□□□ -0.42
PMF1-202ENST00000368277 DUSP8Q13202 625 aa12.41□□□□□ -0.42
PMF1-202ENST00000368277 NAB1Q13506 487 aa12.41□□□□□ -0.42
PMF1-202ENST00000368277 PCBP2Q15366 365 aaKnown RBP eCLIP12.41□□□□□ -0.421e-6■■□□□ 12.8
PMF1-202ENST00000368277 NTRK2Q16620 822 aa12.41□□□□□ -0.42
PMF1-202ENST00000368277 FAM83EQ2M2I3 478 aa12.41□□□□□ -0.42
PMF1-202ENST00000368277 SGO1Q5FBB7 561 aa12.41□□□□□ -0.42
PMF1-202ENST00000368277 DCST1Q5T197 706 aa12.41□□□□□ -0.42
PMF1-202ENST00000368277 FAM180BQ6P0A1 224 aa12.41□□□□□ -0.42
PMF1-202ENST00000368277 NUDT13Q86X67 352 aa12.41□□□□□ -0.42
PMF1-202ENST00000368277 LIX1Q8N485 282 aa12.41□□□□□ -0.42
PMF1-202ENST00000368277 SIMC1Q8NDZ2 872 aa12.41□□□□□ -0.42
PMF1-202ENST00000368277 TNIP2Q8NFZ5 429 aa12.41□□□□□ -0.42
PMF1-202ENST00000368277 RHEBL1Q8TAI7 183 aa12.41□□□□□ -0.42
PMF1-202ENST00000368277 NEIL3Q8TAT5 605 aa12.41□□□□□ -0.42
PMF1-202ENST00000368277 ZNF597Q96LX8 424 aa12.41□□□□□ -0.42
PMF1-202ENST00000368277 GPATCH1Q9BRR8 931 aaKnown RBP12.41□□□□□ -0.42
PMF1-202ENST00000368277 MRPL1Q9BYD6 325 aaKnown RBP12.41□□□□□ -0.42
PMF1-202ENST00000368277 ZDHHC18Q9NUE0 388 aa12.41□□□□□ -0.42
PMF1-202ENST00000368277 KCNN3Q9UGI6 736 aa12.41□□□□□ -0.42
PMF1-202ENST00000368277 ADGRE2Q9UHX3 823 aa12.41□□□□□ -0.42
PMF1-202ENST00000368277 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.41□□□□□ -0.427e-21■■□□□ 12.3
PMF1-202ENST00000368277 MAP1AP78559 2803 aaPredicted RBP12.4□□□□□ -0.42
PMF1-202ENST00000368277 C2orf92A0A1B0GVN3 265 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 GNB5O14775 395 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 TRAPPC6AO75865 159 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 ACSL3O95573 720 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 KLK1P06870 262 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 NT5EP21589 574 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 SERPINB3P29508 390 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 TYK2P29597 1187 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 UQCRC1P31930 480 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 SERPINB8P50452 374 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 AGFG1P52594 562 aaKnown RBP12.4□□□□□ -0.42
PMF1-202ENST00000368277 IST1P53990 364 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 CAV1Q03135 178 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 DUSP2Q05923 314 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 CRYZQ08257 329 aaKnown RBP12.4□□□□□ -0.42
PMF1-202ENST00000368277 TRAF3Q13114 568 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 ACAP2Q15057 778 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 CES4AQ5XG92 561 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 OR52E8Q6IFG1 317 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 FAM111BQ6SJ93 734 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 ARSKQ6UWY0 536 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 PLXDC2Q6UX71 529 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 SPNS3Q6ZMD2 512 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 CLYBLQ8N0X4 340 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 SLC15A4Q8N697 577 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 L3MBTL4Q8NA19 623 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 UHMK1Q8TAS1 419 aaKnown RBP12.4□□□□□ -0.42
PMF1-202ENST00000368277 REPS1Q96D71 796 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 RILPQ96NA2 401 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 PELOQ9BRX2 385 aaKnown RBP12.4□□□□□ -0.42
PMF1-202ENST00000368277 LRRC1Q9BTT6 524 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 CXorf21Q9HAI6 301 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 ZBTB26Q9HCK0 441 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 FARSBQ9NSD9 589 aaKnown RBP12.4□□□□□ -0.42
PMF1-202ENST00000368277 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.4□□□□□ -0.42
PMF1-202ENST00000368277 DNAJB12Q9NXW2 375 aaKnown RBP12.4□□□□□ -0.42
PMF1-202ENST00000368277 XPR1Q9UBH6 696 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 TSC22D4Q9Y3Q8 395 aa12.4□□□□□ -0.42
PMF1-202ENST00000368277 C2orf72A6NCS6 295 aa12.39□□□□□ -0.43
PMF1-202ENST00000368277 PPP6CO00743 305 aa12.39□□□□□ -0.43
PMF1-202ENST00000368277 TRIM3O75382 744 aaPredicted RBP12.39□□□□□ -0.43
PMF1-202ENST00000368277 NME6O75414 186 aaPredicted RBP12.39□□□□□ -0.43
PMF1-202ENST00000368277 CLDN9O95484 217 aa12.39□□□□□ -0.43
PMF1-202ENST00000368277 SLC35E2P0CK97 266 aa12.39□□□□□ -0.43
PMF1-202ENST00000368277 BMP5P22003 454 aa12.39□□□□□ -0.43
PMF1-202ENST00000368277 PIK3R1P27986 724 aa12.39□□□□□ -0.43
PMF1-202ENST00000368277 CCNG1P51959 295 aa12.39□□□□□ -0.43
PMF1-202ENST00000368277 CUL3Q13618 768 aa12.39□□□□□ -0.43
PMF1-202ENST00000368277 EXOSC7Q15024 291 aaKnown RBP12.39□□□□□ -0.43
PMF1-202ENST00000368277 RPS6KA2Q15349 733 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms