RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 CHI3L1P36222 383 aaPredicted RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 IKBKEQ14164 716 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 GUCA2BQ16661 112 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 CUZD1Q86UP6 607 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 ARL14Q8N4G2 192 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 WDR48Q8TAF3 677 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 MOGAT1Q96PD6 335 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 IDI2Q9BXS1 227 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 TISP43B9A030 160 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 GCAP28676 217 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 RNASE10Q5GAN6 216 aaKnown RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 PLAG1Q6DJT9 500 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 ADGRG3Q86Y34 549 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 DND1Q8IYX4 353 aaKnown RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 OR4M1Q8NGD0 313 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 STYXQ8WUJ0 223 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 UCK1Q9HA47 277 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 PNPOQ9NVS9 261 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 MED6O75586 246 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 RHOP08100 348 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 HOXA10P31260 410 aaPredicted RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 HOXC13P31276 330 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF852Q6ZMS4 543 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 METTL21AQ8WXB1 218 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 AP1S3Q96PC3 154 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 POMKQ9H5K3 350 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 SRA1Q9HD15 236 aaKnown RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 KLHL13Q9P2N7 655 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF639Q9UID6 485 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 hCG_1818297A0A087WSY0 165 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 OR2AT4A6NND4 320 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 GPR25O00155 361 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 GPR182O15218 404 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 TDP2O95551 362 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 NME3Q13232 169 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 ANGPTL5Q86XS5 388 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 ARMC10Q8N2F6 343 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 DCPSQ96C86 337 aaKnown RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 MXRA8Q9BRK3 442 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 USP22Q9UPT9 525 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 TMEM212A6NML5 194 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 AIPO00170 330 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 CST1P01037 141 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 EPXP11678 715 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 F2RL1P55085 397 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 C6orf141Q5SZD1 244 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 ADCK2Q7Z695 626 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 DDX53Q86TM3 631 aaKnown RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 SLC35F5Q8WV83 523 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 AKT3Q9Y243 479 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 ZBTB14O43829 449 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 AGBL4Q5VU57 503 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 CXorf57Q6NSI4 855 aaKnown RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 HAGHLQ6PII5 290 aaPredicted RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 ZCCHC23Q6ZST2 131 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 HJURPQ8NCD3 748 aaPredicted RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 WNT8BQ93098 351 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 TMEM209Q96SK2 561 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 OMDQ99983 421 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 TRBV23-1A0A0A0MS06 115 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 LGALS8O00214 317 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 CDKN2CP42773 168 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 POU6F2P78424 691 aaPredicted RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 RING1Q06587 406 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 CAMK2GQ13555 558 aaPredicted RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 PRAMEF13Q5VWM6 474 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 KCTD8Q6ZWB6 473 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 MON1BQ7L1V2 547 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 SPRED1Q7Z699 444 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 ADARB2Q9NS39 739 aaKnown RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 PSAT1Q9Y617 370 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 CPED1A4D0V7 1026 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 CTDSP2O14595 271 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 XKRYO14609 159 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 ALDH7A1P49419 539 aaKnown RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 IL20RAQ9UHF4 553 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 GSG1L2A8MUP6 293 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 SYT7O43581 403 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 DCXO43602 365 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 HLA-DQB2P05538 268 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 SLC6A3Q01959 620 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 GLYATQ6IB77 296 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 CYP2R1Q6VVX0 501 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 TXNRD3Q86VQ6 643 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 CARFQ8N187 725 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 RGMAQ96B86 450 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 HSPA12BQ96MM6 686 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 SDCBP2Q9H190 292 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 TMEM27Q9HBJ8 222 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 FAM20BO75063 409 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 CAPN13Q6MZZ7 669 aaPredicted RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 TMPRSS11FQ6ZWK6 438 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 ARRDC1Q8N5I2 433 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 PLK3Q9H4B4 646 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 PLEKHA2Q9HB19 425 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 SMIM30A4D0T7 59 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 RNASET2O00584 256 aaKnown RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 CPSF4O95639 269 aaKnown RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 PPP1R17O96001 155 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 CACNG1Q06432 222 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms