RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 WBP1Q96G27 269 aa7.41□□□□□ -1.22
YBX3-204ENST00000366290 SLC41A2Q96JW4 573 aa7.41□□□□□ -1.22
YBX3-204ENST00000366290 C12orf66Q96MD2 445 aa7.41□□□□□ -1.22
YBX3-204ENST00000366290 FYTTD1Q96QD9 318 aaKnown RBP7.41□□□□□ -1.22
YBX3-204ENST00000366290 CCNL2Q96S94 520 aaPredicted RBP7.41□□□□□ -1.22
YBX3-204ENST00000366290 CD180Q99467 661 aa7.41□□□□□ -1.22
YBX3-204ENST00000366290 NDNQ99608 321 aa7.41□□□□□ -1.22
YBX3-204ENST00000366290 OLFM1Q99784 485 aa7.41□□□□□ -1.22
YBX3-204ENST00000366290 CPNE1Q99829 537 aa7.41□□□□□ -1.22
YBX3-204ENST00000366290 RHOJQ9H4E5 214 aa7.41□□□□□ -1.22
YBX3-204ENST00000366290 TFB2MQ9H5Q4 396 aaKnown RBP7.41□□□□□ -1.22
YBX3-204ENST00000366290 SYNPO2LQ9H987 977 aa7.41□□□□□ -1.22
YBX3-204ENST00000366290 PLEKHA2Q9HB19 425 aa7.41□□□□□ -1.22
YBX3-204ENST00000366290 PPANQ9NQ55 473 aaKnown RBP7.41□□□□□ -1.22
YBX3-204ENST00000366290 IMP3Q9NV31 184 aaKnown RBP7.41□□□□□ -1.22
YBX3-204ENST00000366290 SLC39A1Q9NY26 324 aa7.41□□□□□ -1.22
YBX3-204ENST00000366290 SLC24A2Q9UI40 661 aa7.41□□□□□ -1.22
YBX3-204ENST00000366290 GNPTGQ9UJJ9 305 aa7.41□□□□□ -1.22
YBX3-204ENST00000366290 PILRAQ9UKJ1 303 aa7.41□□□□□ -1.22
YBX3-204ENST00000366290 TMEM184BQ9Y519 407 aaPredicted RBP7.41□□□□□ -1.22
YBX3-204ENST00000366290 DMRT1Q9Y5R6 373 aa7.41□□□□□ -1.22
YBX3-204ENST00000366290 COLEC10Q9Y6Z7 277 aa7.41□□□□□ -1.22
YBX3-204ENST00000366290 NAV2Q8IVL1 2488 aa7.41□□□□□ -1.22
YBX3-204ENST00000366290 HECTD1Q9ULT8 2610 aa7.41□□□□□ -1.22
YBX3-204ENST00000366290 A0A087WUV0 522 aaPredicted RBP7.4□□□□□ -1.22
YBX3-204ENST00000366290 TLCD2A6NGC4 264 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 EIF4E1BA6NMX2 242 aaKnown RBP7.4□□□□□ -1.22
YBX3-204ENST00000366290 STX16-NPEPL1H3BU86 382 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 STX16O14662 325 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 HNRNPRO43390 633 aaKnown RBP7.4□□□□□ -1.22
YBX3-204ENST00000366290 GPC4O75487 556 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 SLCO2B1O94956 709 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 FTH1P02794 183 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 SHBGP04278 402 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 FGF5P12034 268 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 NELFEP18615 380 aaKnown RBP7.4□□□□□ -1.22
YBX3-204ENST00000366290 CD9P21926 228 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 HSD17B3P37058 310 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 GP5P40197 560 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 PCP4P48539 62 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 CSRP3P50461 194 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 CSE1LP55060 971 aaKnown RBP7.4□□□□□ -1.22
YBX3-204ENST00000366290 TAS2R39P59534 338 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 NAB1Q13506 487 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 TGIF1Q15583 401 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 PTRHD1Q6GMV3 140 aaKnown RBP7.4□□□□□ -1.22
YBX3-204ENST00000366290 EMBQ6PCB8 327 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 CEACAM20Q6UY09 585 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 ZFAND4Q86XD8 727 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 CTAGE3PQ8IX95 158 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 MREGQ8N565 214 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 CD200R1Q8TD46 325 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 ADAMTS18Q8TE60 1221 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 SLC44A1Q8WWI5 657 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 KCNJ9Q92806 393 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 NAF1Q96HR8 494 aaKnown RBP7.4□□□□□ -1.22
YBX3-204ENST00000366290 VPS39Q96JC1 886 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 TGM7Q96PF1 710 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 FCRL4Q96PJ5 515 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 CYTH2Q99418 400 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 GPR21Q99679 349 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 GPR22Q99680 433 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 RBBP8Q99708 897 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 MVB12BQ9H7P6 319 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 EURLQ9NYK6 297 aa7.4□□□□□ -1.22
YBX3-204ENST00000366290 COL12A1Q99715 3063 aa7.39□□□□□ -1.23
YBX3-204ENST00000366290 IGHV5-51A0A0C4DH38 117 aa7.39□□□□□ -1.23
YBX3-204ENST00000366290 A8MU76 341 aa7.39□□□□□ -1.23
YBX3-204ENST00000366290 H3BMM5 538 aa7.39□□□□□ -1.23
YBX3-204ENST00000366290 PRYO14603 147 aa7.39□□□□□ -1.23
YBX3-204ENST00000366290 POLR1CO15160 346 aaPredicted RBP7.39□□□□□ -1.23
YBX3-204ENST00000366290 PFDN6O15212 129 aa7.39□□□□□ -1.23
YBX3-204ENST00000366290 KIF1CO43896 1103 aaKnown RBP7.39□□□□□ -1.23
YBX3-204ENST00000366290 TSPAN12O95859 305 aa7.39□□□□□ -1.23
YBX3-204ENST00000366290 TUBBP07437 444 aa7.39□□□□□ -1.23
YBX3-204ENST00000366290 IGFBP2P18065 325 aa7.39□□□□□ -1.23
YBX3-204ENST00000366290 PHBP35232 272 aa7.39□□□□□ -1.23
YBX3-204ENST00000366290 PPP1CAP62136 330 aa7.39□□□□□ -1.23
YBX3-204ENST00000366290 ZKSCAN8Q15776 578 aaPredicted RBP7.39□□□□□ -1.23
YBX3-204ENST00000366290 AWAT1Q58HT5 328 aa7.39□□□□□ -1.23
YBX3-204ENST00000366290 ACSBG2Q5FVE4 666 aa7.39□□□□□ -1.23
YBX3-204ENST00000366290 GRTP1Q5TC63 336 aa7.39□□□□□ -1.23
YBX3-204ENST00000366290 FAM45BPQ6NSW5 357 aa7.39□□□□□ -1.23
YBX3-204ENST00000366290 DUS1LQ6P1R4 473 aaKnown RBP7.39□□□□□ -1.23
YBX3-204ENST00000366290 CYB5D1Q6P9G0 228 aa7.39□□□□□ -1.23
YBX3-204ENST00000366290 TMEM207Q6UWW9 146 aa7.39□□□□□ -1.23
YBX3-204ENST00000366290 CEP97Q8IW35 865 aa7.39□□□□□ -1.23
YBX3-204ENST00000366290 SLC22A15Q8IZD6 547 aa7.39□□□□□ -1.23
YBX3-204ENST00000366290 PTGR2Q8N8N7 351 aaPredicted RBP7.39□□□□□ -1.23
YBX3-204ENST00000366290 GPATCH11Q8N954 259 aa7.39□□□□□ -1.23
YBX3-204ENST00000366290 SIDT2Q8NBJ9 832 aaKnown RBP7.39□□□□□ -1.23
YBX3-204ENST00000366290 SRFBP1Q8NEF9 429 aaKnown RBP7.39□□□□□ -1.23
YBX3-204ENST00000366290 FAM45AQ8TCE6 357 aa7.39□□□□□ -1.23
YBX3-204ENST00000366290 DCAKDQ8WVC6 231 aa7.39□□□□□ -1.23
YBX3-204ENST00000366290 ELMO1Q92556 727 aa7.39□□□□□ -1.23
YBX3-204ENST00000366290 TFGQ92734 400 aaPredicted RBP7.39□□□□□ -1.23
YBX3-204ENST00000366290 CDKL2Q92772 493 aa7.39□□□□□ -1.23
YBX3-204ENST00000366290 MAELQ96JY0 434 aaKnown RBP7.39□□□□□ -1.23
YBX3-204ENST00000366290 PANX3Q96QZ0 392 aa7.39□□□□□ -1.23
YBX3-204ENST00000366290 PAFAH2Q99487 392 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms