RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 PAOXQ6QHF9 649 aa12.6□□□□□ -0.39
TNFRSF1A-202ENST00000366159 RNF111Q6ZNA4 994 aa12.6□□□□□ -0.39
TNFRSF1A-202ENST00000366159 FAM47EQ6ZV65 393 aa12.6□□□□□ -0.39
TNFRSF1A-202ENST00000366159 TRILQ7L0X0 811 aa12.6□□□□□ -0.39
TNFRSF1A-202ENST00000366159 COMMD6Q7Z4G1 85 aa12.6□□□□□ -0.39
TNFRSF1A-202ENST00000366159 DND1Q8IYX4 353 aaKnown RBP12.6□□□□□ -0.39
TNFRSF1A-202ENST00000366159 EID3Q8N140 333 aa12.6□□□□□ -0.39
TNFRSF1A-202ENST00000366159 FBXW8Q8N3Y1 598 aa12.6□□□□□ -0.39
TNFRSF1A-202ENST00000366159 FAM109AQ8N4B1 249 aa12.6□□□□□ -0.39
TNFRSF1A-202ENST00000366159 RPRMLQ8N4K4 120 aa12.6□□□□□ -0.39
TNFRSF1A-202ENST00000366159 CEP112Q8N8E3 955 aa12.6□□□□□ -0.39
TNFRSF1A-202ENST00000366159 OR4K14Q8NGD5 310 aa12.6□□□□□ -0.39
TNFRSF1A-202ENST00000366159 KIF18AQ8NI77 898 aa12.6□□□□□ -0.39
TNFRSF1A-202ENST00000366159 ADIPOR1Q96A54 375 aa12.6□□□□□ -0.39
TNFRSF1A-202ENST00000366159 TM4SF18Q96CE8 201 aa12.6□□□□□ -0.39
TNFRSF1A-202ENST00000366159 CNPPD1Q9BV87 410 aa12.6□□□□□ -0.39
TNFRSF1A-202ENST00000366159 ENKD1Q9H0I2 346 aa12.6□□□□□ -0.39
TNFRSF1A-202ENST00000366159 TP63Q9H3D4 680 aaPredicted RBP12.6□□□□□ -0.39
TNFRSF1A-202ENST00000366159 AHSPQ9NZD4 102 aa12.6□□□□□ -0.39
TNFRSF1A-202ENST00000366159 TRPS1Q9UHF7 1281 aa12.6□□□□□ -0.39
TNFRSF1A-202ENST00000366159 PCDHA9Q9Y5H5 950 aa12.6□□□□□ -0.39
TNFRSF1A-202ENST00000366159 LIPGQ9Y5X9 500 aa12.6□□□□□ -0.39
TNFRSF1A-202ENST00000366159 PKDREJQ9NTG1 2253 aa12.59□□□□□ -0.39
TNFRSF1A-202ENST00000366159 OR14I1A6ND48 311 aa12.59□□□□□ -0.39
TNFRSF1A-202ENST00000366159 SUSD5O60279 629 aa12.59□□□□□ -0.39
TNFRSF1A-202ENST00000366159 OR10H2O60403 315 aa12.59□□□□□ -0.39
TNFRSF1A-202ENST00000366159 DLX3O60479 287 aa12.59□□□□□ -0.39
TNFRSF1A-202ENST00000366159 CELA3AP09093 270 aa12.59□□□□□ -0.39
TNFRSF1A-202ENST00000366159 PIK3R1P27986 724 aa12.59□□□□□ -0.39
TNFRSF1A-202ENST00000366159 SSTR4P31391 388 aa12.59□□□□□ -0.39
TNFRSF1A-202ENST00000366159 XKP51811 444 aa12.59□□□□□ -0.39
TNFRSF1A-202ENST00000366159 CLCQ05315 142 aa12.59□□□□□ -0.39
TNFRSF1A-202ENST00000366159 MGAT2Q10469 447 aa12.59□□□□□ -0.39
TNFRSF1A-202ENST00000366159 SLC29A2Q14542 456 aa12.59□□□□□ -0.39
TNFRSF1A-202ENST00000366159 GXYLT1Q4G148 440 aa12.59□□□□□ -0.39
TNFRSF1A-202ENST00000366159 CCNYL2Q5T2Q4 361 aa12.59□□□□□ -0.39
TNFRSF1A-202ENST00000366159 TTC19Q6DKK2 380 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF1A-202ENST00000366159 SLC48A1Q6P1K1 146 aa12.59□□□□□ -0.39
TNFRSF1A-202ENST00000366159 SLC29A4Q7RTT9 530 aa12.59□□□□□ -0.39
TNFRSF1A-202ENST00000366159 PAGE2Q7Z2X7 111 aa12.59□□□□□ -0.39
TNFRSF1A-202ENST00000366159 IFT20Q8IY31 132 aa12.59□□□□□ -0.39
TNFRSF1A-202ENST00000366159 ELOVL6Q9H5J4 265 aa12.59□□□□□ -0.39
TNFRSF1A-202ENST00000366159 RUBCNLQ9H714 662 aa12.59□□□□□ -0.39
TNFRSF1A-202ENST00000366159 CNIH4Q9P003 139 aa12.59□□□□□ -0.39
TNFRSF1A-202ENST00000366159 ZNF639Q9UID6 485 aa12.59□□□□□ -0.39
TNFRSF1A-202ENST00000366159 CNOT11Q9UKZ1 510 aaKnown RBP12.59□□□□□ -0.39
TNFRSF1A-202ENST00000366159 SNX6Q9UNH7 406 aa12.59□□□□□ -0.39
TNFRSF1A-202ENST00000366159 DNAJC13O75165 2243 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 PHF3Q92576 2039 aaKnown RBP12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ANKRD33BA6NCL7 494 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 LRRC3CA6NJW4 275 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 AQP7O14520 342 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 OR4F21O95013 312 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 RFPL3SP0C7P2 107 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 CPMP14384 443 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 PORP16435 677 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 IGFBP2P18065 325 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 IMPDH1P20839 514 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ENDOUP21128 410 aaKnown RBP12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 SERPINB3P29508 390 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ARL1P40616 181 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 SLC10A1Q14973 349 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 SGO1Q5FBB7 561 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 RTL6Q6ICC9 239 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 TMEM211Q6ICI0 200 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 SH2D5Q6ZV89 423 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 GALNT12Q8IXK2 581 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 SRRM1Q8IYB3 904 aaKnown RBP12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 LRRC25Q8N386 305 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 C17orf47Q8NEP4 570 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 OR10G3Q8NGC4 313 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ACMSDQ8TDX5 336 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 CHTF18Q8WVB6 975 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 SELENOMQ8WWX9 145 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 SDCCAG3Q96C92 435 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 CTHRC1Q96CG8 243 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 C11orf24Q96F05 449 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ZNF681Q96N22 645 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 TMEM237Q96Q45 408 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 GAL3ST4Q96RP7 486 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ZNF382Q96SR6 550 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 SPOCK3Q9BQ16 436 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 OR10A5Q9H207 317 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ZNF703Q9H7S9 590 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ZFP64Q9NPA5 681 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 PNPLA3Q9NST1 481 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 SLC12A4Q9UP95 1085 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 FAM215AQ9Y5M1 114 aa12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.58□□□□□ -0.4
TNFRSF1A-202ENST00000366159 NCKAP5O14513 1909 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 C2orf92A0A1B0GVN3 265 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 C1orf226A1L170 272 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 NPIPA2E9PIF3 369 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 NPIPA3F8WFD2 350 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 MANBAO00462 879 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 BCKDKO14874 412 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 HCN1O60741 890 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 TRIM3O75382 744 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 ATP1B1P05026 303 aa12.57□□□□□ -0.4
TNFRSF1A-202ENST00000366159 HSD3B1P14060 373 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms