RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 RPN2P04844 631 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 EIF2S1P05198 315 aaKnown RBP4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 APOA4P06727 396 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 UQCRHP07919 91 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 TMIGD3P0DMS9 266 aaPredicted RBP4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 MATN1P21941 496 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 PSMA3P25788 255 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 GRIA1P42261 906 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 BDKRB1P46663 353 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 STT3AP46977 705 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 PRIM2P49643 509 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 KCNK10P57789 538 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 PRAMEP78395 509 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 HSF1Q00613 529 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 PLOD1Q02809 727 aaPredicted RBP4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 EEF1A2Q05639 463 aaKnown RBP4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 KLC1Q07866 573 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 MFAP5Q13361 173 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 ZRSR2Q15696 482 aaKnown RBP4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 P3H1Q32P28 736 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 CCSMST1Q4G0I0 132 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 FASTKD1Q53R41 847 aaKnown RBP4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 VWA2Q5GFL6 755 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 TCTE1Q5JU00 501 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 WASHC2DQ5SRD0 308 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 FAAH2Q6GMR7 532 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 ABLIM2Q6H8Q1 611 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 FRMPD2BQ6IN97 320 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 AFTPHQ6ULP2 937 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 IGFL2Q6UWQ7 119 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 ISLR2Q6UXK2 745 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 UNC5DQ6UXZ4 953 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 PPP1R21Q6ZMI0 780 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 ZNF534Q76KX8 674 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 NLRP9Q7RTR0 991 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 PRUNE1Q86TP1 453 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 LINC00523Q86TU6 105 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 DCUN1D3Q8IWE4 304 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 CCDC170Q8IYT3 715 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 OR4N4Q8N0Y3 316 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 RNF152Q8N8N0 203 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 TTC29Q8NA56 475 aaPredicted RBP4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 ACRBPQ8NEB7 543 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 OR1N1Q8NGS0 311 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 OR2L8Q8NGY9 312 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 OR4L1Q8NH43 312 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 SUN3Q8TAQ9 357 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 STT3BQ8TCJ2 826 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 SKA2Q8WVK7 121 aaPredicted RBP4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 ASZ1Q8WWH4 475 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 SLC22A18Q96BI1 424 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 SLX1AQ9BQ83 275 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 SLC26A1Q9H2B4 701 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 MRM3Q9HC36 420 aaKnown RBP4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 ZNF160Q9HCG1 818 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 ZNF304Q9HCX3 659 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 OLAHQ9NV23 265 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 MARCH4Q9P2E8 410 aaPredicted RBP4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 C3orf18Q9UK00 162 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 NXT1Q9UKK6 140 aaKnown RBP4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 TTC7AQ9ULT0 858 aaPredicted RBP4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 ENTPD4Q9Y227 616 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 NFS1Q9Y697 457 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 CPAMD8Q8IZJ3 1885 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 DOPEY1Q5JWR5 2465 aa4.89□□□□□ -1.63
RNU4-4P-201ENST00000364588 LRBAP50851 2863 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 POLEQ07864 2286 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 NSG1A0A0A6YYJ2 146 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 A0A0U1RQJ8 604 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 A0A1B0GUH1 482 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 DYTNA2CJ06 578 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 VSTM2BA6NLU5 285 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 E7EVH7 732 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 SOCS2O14508 198 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 PRAMEF2O60811 474 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 ZNF189O75820 626 aaPredicted RBP4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 SLCO2B1O94956 709 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 IPO7O95373 1038 aaKnown RBP4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 C1orf105O95561 183 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 FTCDO95954 541 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 HPP00738 406 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 IFNB1P01574 187 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 STSP08842 583 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 ETS1P14921 441 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 ELAVL4P26378 380 aaKnown RBP4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 RPS13P62277 151 aaKnown RBP4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 ARG2P78540 354 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 CRADDP78560 199 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 ID2Q02363 134 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 CDH17Q12864 832 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 TSTA3Q13630 321 aaPredicted RBP4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 FASTKQ14296 549 aaKnown RBP4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 TMED2Q15363 201 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 PTRHD1Q6GMV3 140 aaKnown RBP4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 TTC23LQ6PF05 361 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 CNSTQ6PJW8 725 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 GFRALQ6UXV0 394 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 RAD9BQ6WBX8 426 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 DEF8Q6ZN54 512 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 PEX26Q7Z412 305 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms