RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 VPS29Q9UBQ0 182 aa18.09■□□□□ 0.49
CMTM3-201ENST00000361909 CLEC2DQ9UHP7 191 aa18.09■□□□□ 0.49
CMTM3-201ENST00000361909 SLC6A14Q9UN76 642 aa18.09■□□□□ 0.49
CMTM3-201ENST00000361909 MGAT4BQ9UQ53 548 aa18.09■□□□□ 0.49
CMTM3-201ENST00000361909 SNX11Q9Y5W9 270 aa18.09■□□□□ 0.49
CMTM3-201ENST00000361909 INMT-MINDY4F8WBC2 141 aa18.08■□□□□ 0.49
CMTM3-201ENST00000361909 MEN1O00255 615 aa18.08■□□□□ 0.49
CMTM3-201ENST00000361909 SLC30A4O14863 429 aa18.08■□□□□ 0.49
CMTM3-201ENST00000361909 PCDH17O14917 1159 aa18.08■□□□□ 0.49
CMTM3-201ENST00000361909 FZD6O60353 706 aa18.08■□□□□ 0.49
CMTM3-201ENST00000361909 INPP1P49441 399 aa18.08■□□□□ 0.49
CMTM3-201ENST00000361909 AP1S1P61966 158 aa18.08■□□□□ 0.49
CMTM3-201ENST00000361909 GAB1Q13480 694 aa18.08■□□□□ 0.49
CMTM3-201ENST00000361909 ZNF630Q2M218 657 aaPredicted RBP18.08■□□□□ 0.49
CMTM3-201ENST00000361909 KLHL12Q53G59 568 aa18.08■□□□□ 0.49
CMTM3-201ENST00000361909 ANKRD54Q6NXT1 300 aa18.08■□□□□ 0.49
CMTM3-201ENST00000361909 KCTD20Q7Z5Y7 419 aa18.08■□□□□ 0.49
CMTM3-201ENST00000361909 GPALPP1Q8IXQ4 340 aa18.08■□□□□ 0.49
CMTM3-201ENST00000361909 OR52N2Q8NGI0 321 aa18.08■□□□□ 0.49
CMTM3-201ENST00000361909 KATNB1Q9BVA0 655 aa18.08■□□□□ 0.49
CMTM3-201ENST00000361909 LINC00597Q9H2U6 94 aa18.08■□□□□ 0.49
CMTM3-201ENST00000361909 ASB8Q9H765 288 aa18.08■□□□□ 0.49
CMTM3-201ENST00000361909 EMC7Q9NPA0 242 aa18.08■□□□□ 0.49
CMTM3-201ENST00000361909 DNAJC11Q9NVH1 559 aa18.08■□□□□ 0.49
CMTM3-201ENST00000361909 NLKQ9UBE8 527 aa18.08■□□□□ 0.49
CMTM3-201ENST00000361909 QSOX1O00391 747 aa18.08■□□□□ 0.48
CMTM3-201ENST00000361909 GPR39O43194 453 aa18.08■□□□□ 0.48
CMTM3-201ENST00000361909 PCDH7O60245 1069 aa18.08■□□□□ 0.48
CMTM3-201ENST00000361909 RAB36O95755 333 aa18.08■□□□□ 0.48
CMTM3-201ENST00000361909 TPOP07202 933 aa18.08■□□□□ 0.48
CMTM3-201ENST00000361909 FGF9P31371 208 aaPredicted RBP18.08■□□□□ 0.48
CMTM3-201ENST00000361909 MAPK8P45983 427 aa18.08■□□□□ 0.48
CMTM3-201ENST00000361909 GSTM5P46439 218 aa18.08■□□□□ 0.48
CMTM3-201ENST00000361909 TGM4P49221 684 aa18.08■□□□□ 0.48
CMTM3-201ENST00000361909 ACSM2AQ08AH3 577 aa18.08■□□□□ 0.48
CMTM3-201ENST00000361909 SP140Q13342 867 aa18.08■□□□□ 0.48
CMTM3-201ENST00000361909 MFSD13AQ14CX5 517 aa18.08■□□□□ 0.48
CMTM3-201ENST00000361909 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.08■□□□□ 0.48
CMTM3-201ENST00000361909 SLC25A30Q5SVS4 291 aa18.08■□□□□ 0.48
CMTM3-201ENST00000361909 ACSM2BQ68CK6 577 aa18.08■□□□□ 0.48
CMTM3-201ENST00000361909 CNIH2Q6PI25 160 aa18.08■□□□□ 0.48
CMTM3-201ENST00000361909 MBOAT1Q6ZNC8 495 aa18.08■□□□□ 0.48
CMTM3-201ENST00000361909 QSOX2Q6ZRP7 698 aa18.08■□□□□ 0.48
CMTM3-201ENST00000361909 LAPTM4BQ86VI4 370 aa18.08■□□□□ 0.48
CMTM3-201ENST00000361909 TMEM145Q8NBT3 493 aa18.08■□□□□ 0.48
CMTM3-201ENST00000361909 SLC37A3Q8NCC5 494 aa18.08■□□□□ 0.48
CMTM3-201ENST00000361909 BOCQ9BWV1 1114 aa18.08■□□□□ 0.48
CMTM3-201ENST00000361909 SLC12A9Q9BXP2 914 aa18.08■□□□□ 0.48
CMTM3-201ENST00000361909 PRSS21Q9Y6M0 314 aa18.08■□□□□ 0.48
CMTM3-201ENST00000361909 NEDD8-MDP1E9PL57 170 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 GAPDHSO14556 408 aaPredicted RBP18.07■□□□□ 0.48
CMTM3-201ENST00000361909 TYRP14679 529 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 LHCGRP22888 699 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 IL32P24001 234 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 AOAHP28039 575 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 C22orf42Q6IC83 251 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 MZT2AQ6P582 158 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 FAM151BQ6UXP7 276 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 ZNF680Q8NEM1 530 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 TSSK6Q9BXA6 273 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 BHLHE41Q9C0J9 482 aaPredicted RBP18.07■□□□□ 0.48
CMTM3-201ENST00000361909 KCNN2Q9H2S1 579 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 C12orf4Q9NQ89 552 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 SPATA6Q9NWH7 488 aaPredicted RBP18.07■□□□□ 0.48
CMTM3-201ENST00000361909 HCN2Q9UL51 889 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 FCF1Q9Y324 198 aaKnown RBP18.07■□□□□ 0.48
CMTM3-201ENST00000361909 CDH10Q9Y6N8 788 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 C2orf16Q68DN1 1984 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 OPN1SWP03999 348 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 IFNW1P05000 195 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 HIST1H2AGP0C0S8 130 aaPredicted RBP18.07■□□□□ 0.48
CMTM3-201ENST00000361909 SRCP12931 536 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 POU3F3P20264 500 aaPredicted RBP18.07■□□□□ 0.48
CMTM3-201ENST00000361909 TNFRSF1BP20333 461 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 HIST1H2ADP20671 130 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 OR1E2P47887 323 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 TPBGQ13641 420 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 C3orf38Q5JPI3 329 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 CLLU1Q5K131 121 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 LY6G5CQ5SRR4 150 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 TRIM40Q6P9F5 258 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 USP30Q70CQ3 517 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 C11orf24Q96F05 449 aaPredicted RBP18.07■□□□□ 0.48
CMTM3-201ENST00000361909 HIST1H2AHQ96KK5 128 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 HIST1H2AJQ99878 128 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 H2AFJQ9BTM1 129 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 BRF2Q9HAW0 419 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 GDE1Q9NZC3 331 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 ANGPT4Q9Y264 503 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 HS3ST2Q9Y278 367 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 STON1Q9Y6Q2 735 aa18.07■□□□□ 0.48
CMTM3-201ENST00000361909 SLC16A5O15375 505 aa18.06■□□□□ 0.48
CMTM3-201ENST00000361909 YY2O15391 372 aa18.06■□□□□ 0.48
CMTM3-201ENST00000361909 GASTP01350 101 aa18.06■□□□□ 0.48
CMTM3-201ENST00000361909 RAF1P04049 648 aa18.06■□□□□ 0.48
CMTM3-201ENST00000361909 POU2F1P14859 743 aa18.06■□□□□ 0.48
CMTM3-201ENST00000361909 APEX1P27695 318 aaKnown RBP18.06■□□□□ 0.48
CMTM3-201ENST00000361909 CRATP43155 626 aa18.06■□□□□ 0.48
CMTM3-201ENST00000361909 MVDP53602 400 aa18.06■□□□□ 0.48
CMTM3-201ENST00000361909 HEPACAMQ14CZ8 416 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms