RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 PSKH1P11801 424 aa17.69■□□□□ 0.42
CLIP2-202ENST00000361545 NR0B1P51843 470 aaKnown RBP17.69■□□□□ 0.42
CLIP2-202ENST00000361545 CTC1Q2NKJ3 1217 aa17.69■□□□□ 0.42
CLIP2-202ENST00000361545 ZNF611Q8N823 705 aa17.69■□□□□ 0.42
CLIP2-202ENST00000361545 OR4C15Q8NGM1 316 aa17.69■□□□□ 0.42
CLIP2-202ENST00000361545 HPF1Q9NWY4 346 aa17.69■□□□□ 0.42
CLIP2-202ENST00000361545 TRNAU1APQ9NX07 287 aaKnown RBP17.69■□□□□ 0.42
CLIP2-202ENST00000361545 HTR1EP28566 365 aa17.69■□□□□ 0.42
CLIP2-202ENST00000361545 HOXC13P31276 330 aa17.69■□□□□ 0.42
CLIP2-202ENST00000361545 GCGRP47871 477 aa17.69■□□□□ 0.42
CLIP2-202ENST00000361545 ABHD17BQ5VST6 288 aa17.69■□□□□ 0.42
CLIP2-202ENST00000361545 DGLUCYQ7Z3D6 616 aa17.69■□□□□ 0.42
CLIP2-202ENST00000361545 SNX29P2Q8IUI4 249 aa17.69■□□□□ 0.42
CLIP2-202ENST00000361545 SERINC2Q96SA4 455 aa17.69■□□□□ 0.42
CLIP2-202ENST00000361545 CHIAQ9BZP6 476 aa17.69■□□□□ 0.42
CLIP2-202ENST00000361545 SOX17Q9H6I2 414 aaPredicted RBP17.69■□□□□ 0.42
CLIP2-202ENST00000361545 PREBQ9HCU5 417 aa17.69■□□□□ 0.42
CLIP2-202ENST00000361545 ZNF639Q9UID6 485 aa17.69■□□□□ 0.42
CLIP2-202ENST00000361545 SLC22A1O15245 554 aa17.69■□□□□ 0.42
CLIP2-202ENST00000361545 SOX30O94993 753 aa17.69■□□□□ 0.42
CLIP2-202ENST00000361545 AK1P00568 194 aa17.69■□□□□ 0.42
CLIP2-202ENST00000361545 IRS1P35568 1242 aa17.69■□□□□ 0.42
CLIP2-202ENST00000361545 TOR1AIP2Q8NFQ8 470 aa17.69■□□□□ 0.42
CLIP2-202ENST00000361545 PLEKHA6Q9Y2H5 1048 aa17.69■□□□□ 0.42
CLIP2-202ENST00000361545 HTR3EA5X5Y0 456 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 CCR7P32248 378 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 ZFP69Q49AA0 526 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 SFT2D3Q587I9 215 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 SP140LQ9H930 580 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 BRF2Q9HAW0 419 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 POU2F3Q9UKI9 436 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 KIR2DS5A0A0G2JLQ3 304 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 A0A0G2JNG1 304 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 G3V2L1 256 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 KIR2DS3K7RE56 304 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 PPM1BO75688 479 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 GPR4P46093 362 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 MRPS21P82921 87 aaKnown RBP17.68■□□□□ 0.42
CLIP2-202ENST00000361545 KIR2DS5Q14953 304 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 TMPPEQ6ZT21 453 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 OR14L1PQ8NHC6 308 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 ARRDC2Q8TBH0 407 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 SGTBQ96EQ0 304 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 NANSQ9NR45 359 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 EPHA6Q9UF33 1036 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 SIT1Q9Y3P8 196 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 PLCH1Q4KWH8 1693 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 VIRMAQ69YN4 1812 aaKnown RBP17.68■□□□□ 0.42
CLIP2-202ENST00000361545 METTL21EPA6NDL7 271 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 MVKQ03426 396 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 CBLBQ13191 982 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 TRNP1Q6NT89 227 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 PRR22Q8IZ63 422 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 TMEM41AQ96HV5 264 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 LRIT1Q9P2V4 623 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 CPNE7Q9UBL6 633 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 LOC100509620A0A075B734 347 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 FAM189A1O60320 539 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 H2BFMP0C1H6 154 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 SLC2A2P11168 524 aaPredicted RBP17.68■□□□□ 0.42
CLIP2-202ENST00000361545 RAB2AP61019 212 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 KCNAB2Q13303 367 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 CBFBQ13951 182 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 FIP1L1Q6UN15 594 aaKnown RBP17.68■□□□□ 0.42
CLIP2-202ENST00000361545 OR2L2Q8NH16 312 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 CIDECQ96AQ7 238 aaPredicted RBP17.68■□□□□ 0.42
CLIP2-202ENST00000361545 LHX3Q9UBR4 397 aa17.68■□□□□ 0.42
CLIP2-202ENST00000361545 PRAMEF2O60811 474 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 KDM4BO94953 1096 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 F11P03951 625 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 GRPRP30550 384 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 FOLR3P41439 243 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 C4orf46Q504U0 113 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 PKDCCQ504Y2 493 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 SPIN3Q5JUX0 258 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 TMEM17Q86X19 198 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 CHCHD4Q8N4Q1 142 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 OR2L8Q8NGY9 312 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 SLC39A13Q96H72 371 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 DKK3Q9UBP4 350 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 HSPA12AO43301 675 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 FOXA1P55317 472 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 GALK2Q01415 458 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 TUBB3Q13509 450 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 MOGSQ13724 837 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 KIR2DS3Q14952 304 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 NADK2Q4G0N4 442 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 OR9A2Q8NGT5 310 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 SYT11Q9BT88 431 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 YTHDF1Q9BYJ9 559 aaKnown RBP17.67■□□□□ 0.42
CLIP2-202ENST00000361545 LOC285095A0A1B0GVY8 99 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 ORC5O43913 435 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 SNAP29O95721 258 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 S1PR1P21453 382 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 CSNK1EP49674 416 aaKnown RBP17.67■□□□□ 0.42
CLIP2-202ENST00000361545 SGSHP51688 502 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 EMP2P54851 167 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 RTN4RL1Q86UN2 441 aaPredicted RBP17.67■□□□□ 0.42
CLIP2-202ENST00000361545 OR2A12Q8NGT7 310 aa17.67■□□□□ 0.42
CLIP2-202ENST00000361545 POLE3Q9NRF9 147 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms