RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 TNRC6CQ9HCJ0 1690 aaKnown RBP11.68□□□□□ -0.54
DNMT1-202ENST00000359526 C1orf226A1L170 272 aa11.68□□□□□ -0.54
DNMT1-202ENST00000359526 HOXA11P31270 313 aaPredicted RBP11.68□□□□□ -0.54
DNMT1-202ENST00000359526 PREPP48147 710 aa11.68□□□□□ -0.54
DNMT1-202ENST00000359526 GFOD2Q3B7J2 385 aa11.68□□□□□ -0.54
DNMT1-202ENST00000359526 LY6G5CQ5SRR4 150 aa11.68□□□□□ -0.54
DNMT1-202ENST00000359526 RPLP0P6Q8NHW5 317 aa11.68□□□□□ -0.54
DNMT1-202ENST00000359526 IGSF8Q969P0 613 aa11.68□□□□□ -0.54
DNMT1-202ENST00000359526 SLA2Q9H6Q3 261 aa11.68□□□□□ -0.54
DNMT1-202ENST00000359526 COPZ2Q9P299 210 aa11.68□□□□□ -0.54
DNMT1-202ENST00000359526 GOLGA4Q13439 2230 aaKnown RBP11.68□□□□□ -0.54
DNMT1-202ENST00000359526 KLF8O95600 359 aaPredicted RBP11.68□□□□□ -0.54
DNMT1-202ENST00000359526 CELP19835 753 aa11.68□□□□□ -0.54
DNMT1-202ENST00000359526 LHCGRP22888 699 aa11.68□□□□□ -0.54
DNMT1-202ENST00000359526 ACTA2P62736 377 aa11.68□□□□□ -0.54
DNMT1-202ENST00000359526 ACTG2P63267 376 aa11.68□□□□□ -0.54
DNMT1-202ENST00000359526 SH3BP2P78314 561 aa11.68□□□□□ -0.54
DNMT1-202ENST00000359526 KEAP1Q14145 624 aa11.68□□□□□ -0.54
DNMT1-202ENST00000359526 ZNF767PQ75MW2 155 aa11.68□□□□□ -0.54
DNMT1-202ENST00000359526 KCT2Q8NC54 265 aa11.68□□□□□ -0.54
DNMT1-202ENST00000359526 OR51G2Q8NGK0 314 aa11.68□□□□□ -0.54
DNMT1-202ENST00000359526 RAB8BQ92930 207 aa11.68□□□□□ -0.54
DNMT1-202ENST00000359526 SLC39A1Q9NY26 324 aa11.68□□□□□ -0.54
DNMT1-202ENST00000359526 MARCH4Q9P2E8 410 aaPredicted RBP11.68□□□□□ -0.54
DNMT1-202ENST00000359526 SLC22A31A6NKX4 558 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 ZNF878C9JN71 531 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 NME4O00746 187 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 NUAK1O60285 661 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 RGS9O75916 674 aaPredicted RBP11.67□□□□□ -0.54
DNMT1-202ENST00000359526 HMGCLP35914 325 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 FNTBP49356 437 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 AFF1P51825 1210 aaKnown RBP11.67□□□□□ -0.54
DNMT1-202ENST00000359526 INHBCP55103 352 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 RAB8AP61006 207 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 NFE2L1Q14494 772 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 SF3B4Q15427 424 aaKnown RBP eCLIP11.67□□□□□ -0.549e-7■■■■■ 28.6
DNMT1-202ENST00000359526 TMEM35AQ53FP2 167 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 BORAQ6PGQ7 559 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 HTR3DQ70Z44 454 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 TMEM181Q9P2C4 612 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 ABCD2Q9UBJ2 740 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 PRODH2Q9UF12 536 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 LAMB1P07942 1786 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 A0A1B0GVI7 797 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 BEST1O76090 585 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 APOC3P02656 99 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 CSTBP04080 98 aaKnown RBP11.67□□□□□ -0.54
DNMT1-202ENST00000359526 KCNC1P48547 511 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 PMS2P3Q13401 168 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 DHCR24Q15392 516 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 GRK1Q15835 563 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 RANBP10Q6VN20 620 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 RHBDF1Q96CC6 855 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 ZNF350Q9GZX5 532 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 GBAP04062 536 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 CFIP05156 583 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 OR12D1P0DN82 309 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 GRK5P34947 590 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 NR4A2P43354 598 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 CTBP2P56545 445 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 CBFBQ13951 182 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 UGT3A2Q3SY77 523 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 SLC36A3Q495N2 470 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 GTF2IRD2BQ6EKJ0 949 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 Q6ZVL8 140 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 GTF2IRD2Q86UP8 949 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 ORAI3Q9BRQ5 295 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 TAS2R3Q9NYW6 316 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 TMEM14AQ9Y6G1 99 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 RBBP9O75884 186 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 DNASE1P24855 282 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 PITX1P78337 314 aaPredicted RBP11.67□□□□□ -0.54
DNMT1-202ENST00000359526 SNTA1Q13424 505 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 PSAPL1Q6NUJ1 521 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 UBQLNLQ8IYU4 475 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 GDPD1Q8N9F7 314 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 OR52N2Q8NGI0 321 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 SGCDQ92629 289 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 FUBP1Q96AE4 644 aaKnown RBP11.67□□□□□ -0.54
DNMT1-202ENST00000359526 CHFRQ96EP1 664 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 NCDNQ9UBB6 729 aa11.67□□□□□ -0.54
DNMT1-202ENST00000359526 TEX13CA0A0J9YWL9 993 aa11.66□□□□□ -0.54
DNMT1-202ENST00000359526 CSN2P05814 226 aa11.66□□□□□ -0.54
DNMT1-202ENST00000359526 STSP08842 583 aa11.66□□□□□ -0.54
DNMT1-202ENST00000359526 VAMP1P23763 118 aa11.66□□□□□ -0.54
DNMT1-202ENST00000359526 ZMYND11Q15326 602 aa11.66□□□□□ -0.54
DNMT1-202ENST00000359526 UAP1L1Q3KQV9 507 aa11.66□□□□□ -0.54
DNMT1-202ENST00000359526 KCTD18Q6PI47 426 aaPredicted RBP11.66□□□□□ -0.54
DNMT1-202ENST00000359526 ABHD11Q8NFV4 315 aa11.66□□□□□ -0.54
DNMT1-202ENST00000359526 OR4E2Q8NGC2 313 aa11.66□□□□□ -0.54
DNMT1-202ENST00000359526 NSMAFQ92636 917 aa11.66□□□□□ -0.54
DNMT1-202ENST00000359526 ZNF689Q96CS4 500 aaPredicted RBP11.66□□□□□ -0.54
DNMT1-202ENST00000359526 MYNNQ9NPC7 610 aa11.66□□□□□ -0.54
DNMT1-202ENST00000359526 SPATA6Q9NWH7 488 aaPredicted RBP11.66□□□□□ -0.54
DNMT1-202ENST00000359526 COQ3Q9NZJ6 369 aa11.66□□□□□ -0.54
DNMT1-202ENST00000359526 WNT6Q9Y6F9 365 aa11.66□□□□□ -0.54
DNMT1-202ENST00000359526 WASHC1A8K0Z3 465 aa11.66□□□□□ -0.54
DNMT1-202ENST00000359526 CLCA1A8K7I4 914 aa11.66□□□□□ -0.54
DNMT1-202ENST00000359526 WASH3PC4AMC7 463 aa11.66□□□□□ -0.54
DNMT1-202ENST00000359526 TGM5O43548 720 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms