RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 ZSCAN5BA6NJL1 495 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 MYO1GB0I1T2 1018 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 FAM220BPB1ANY3 271 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 UPK1AO00322 258 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 GNGT2O14610 69 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 CLOCKO15516 846 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 PRMT3O60678 531 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 GCM2O75603 506 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-202ENST00000359366 CST1P01037 141 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 LDLRP01130 860 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 GPIP06744 558 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 FAM58BPP0C7Q3 252 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 BMP2P12643 396 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 RPS2P15880 293 aaKnown RBP4.81□□□□□ -1.64
ATXN3-202ENST00000359366 DDCP20711 480 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 LORP23490 312 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-202ENST00000359366 CXCR2P25025 360 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 SHMT2P34897 504 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 GRK3P35626 688 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 RXRGP48443 463 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 HSPA13P48723 471 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 YPEL5P62699 121 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 VLDLRP98155 873 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 HHEXQ03014 270 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 ZNF33BQ06732 778 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 ABHD18Q0P651 414 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 SCRN3Q0VDG4 424 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 TP53BP2Q13625 1128 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 PDE7AQ13946 482 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 LTB4RQ15722 352 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 RGS21Q2M5E4 152 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 DPY19L1Q2PZI1 675 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 SPDYE7PQ495Y7 208 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 FAM98BQ52LJ0 330 aaKnown RBP4.81□□□□□ -1.64
ATXN3-202ENST00000359366 IGSF11Q5DX21 431 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 NKAIN2Q5VXU1 208 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 FKBP9P1Q75LS8 142 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 STK32CQ86UX6 486 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 PAQR7Q86WK9 346 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 NUDT13Q86X67 352 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 CCDC28AQ8IWP9 274 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 CCDC116Q8IYX3 515 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 ANKFN1Q8N957 763 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 FAM47BQ8NA70 645 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 OR5T3Q8NGG3 340 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 OR5D16Q8NGK9 328 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 GPBAR1Q8TDU6 330 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 ZDHHC1Q8WTX9 485 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 DUS3LQ96G46 650 aaKnown RBP4.81□□□□□ -1.64
ATXN3-202ENST00000359366 CENPNQ96H22 339 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-202ENST00000359366 HSH2DQ96JZ2 352 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 COG8Q96MW5 612 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 CSF3RQ99062 836 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 RBCK1Q9BYM8 510 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 BHLHE41Q9C0J9 482 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-202ENST00000359366 FAM60AQ9NP50 221 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 EQTNQ9NQ60 294 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 PRDM7Q9NQW5 492 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 TRNAU1APQ9NX07 287 aaKnown RBP4.81□□□□□ -1.64
ATXN3-202ENST00000359366 SIRT5Q9NXA8 310 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 OR6C2Q9NZP2 312 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 PADI4Q9UM07 663 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 ZNF451Q9Y4E5 1061 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 HEBP2Q9Y5Z4 205 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 ASPMQ8IZT6 3477 aa4.81□□□□□ -1.64
ATXN3-202ENST00000359366 TMEM131Q92545 1883 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 TRAV6A0A075B6T7 132 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 TMEM265A0A087WTH1 108 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 RNASET2O00584 256 aaKnown RBP4.8□□□□□ -1.64
ATXN3-202ENST00000359366 TNFRSF10CO14798 259 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 PDPK1O15530 556 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 TSC22D2O75157 780 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 JRKO75564 520 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 TRMUO75648 421 aaKnown RBP4.8□□□□□ -1.64
ATXN3-202ENST00000359366 PGM3O95394 542 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 AIFM1O95831 613 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 IGLV3-19P01714 112 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 RETP07949 1114 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 HOXC4P09017 264 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-202ENST00000359366 RAP2AP10114 183 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 ATP6V1B1P15313 513 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 GPX2P18283 190 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 HIST1H1TP22492 207 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-202ENST00000359366 ATP5A1P25705 553 aaKnown RBP4.8□□□□□ -1.64
ATXN3-202ENST00000359366 RNF144AP50876 292 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-202ENST00000359366 CCR5P51681 352 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 HSD17B7P56937 341 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 SIM1P81133 766 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-202ENST00000359366 MYBPC1Q00872 1141 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 IL1RL1Q01638 556 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 TSC22D1Q15714 1073 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 GPR19Q15760 415 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 ATP6AP1Q15904 470 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 VMACQ2NL98 169 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 Q3ZCU0 254 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 CLVS2Q5SYC1 327 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 C10orf62Q5T681 223 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-202ENST00000359366 SHEQ5VZ18 495 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 ZNF425Q6IV72 752 aa4.8□□□□□ -1.64
ATXN3-202ENST00000359366 ABHD17CQ6PCB6 329 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms