RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 GRM5P41594 1212 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 TAS2R31P59538 309 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 PROKR2Q8NFJ6 384 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 BTN2A3PQ96KV6 586 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 ADAM18Q9Y3Q7 739 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 AGPAT2O15120 278 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 SLC10A3P09131 477 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 GPX3P22352 226 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 SCNN1GP51170 649 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 SNRPD1P62314 119 aaKnown RBP5.82□□□□□ -1.48
VPS13B-203ENST00000358544 TECRLQ5HYJ1 363 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 SLX4IPQ5VYV7 408 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 SLC27A4Q6P1M0 643 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 TMEM205Q6UW68 189 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 TMPRSS11BQ86T26 416 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 BRSK1Q8TDC3 778 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 NSUN3Q9H649 340 aaKnown RBP5.82□□□□□ -1.48
VPS13B-203ENST00000358544 PLSCR3Q9NRY6 295 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 P2RX2Q9UBL9 471 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 HSPA12AO43301 675 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 RBBP9O75884 186 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 APBA3O96018 575 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 ALPIP09923 528 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 THPOP40225 353 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 SH3BP2P78314 561 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 LY6KQ17RY6 165 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 FBXL18Q96ME1 805 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 DCLRE1CQ96SD1 692 aaKnown RBP5.82□□□□□ -1.48
VPS13B-203ENST00000358544 SLC38A3Q99624 504 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 UBFD1O14562 309 aaKnown RBP5.82□□□□□ -1.48
VPS13B-203ENST00000358544 IMPA2O14732 288 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 PTPRAP18433 802 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 GFOD2Q3B7J2 385 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 CYP27C1Q4G0S4 372 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 ANKLE1Q8NAG6 615 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 NANPQ8TBE9 248 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 L3HYPDHQ96EM0 354 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 IL12RB2Q99665 862 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 DUS2Q9NX74 493 aaKnown RBP5.82□□□□□ -1.48
VPS13B-203ENST00000358544 ZNF223Q9UK11 482 aaPredicted RBP5.82□□□□□ -1.48
VPS13B-203ENST00000358544 NDRG2Q9UN36 371 aaKnown RBP5.82□□□□□ -1.48
VPS13B-203ENST00000358544 POMCP01189 267 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 HTR1AP08908 422 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 RPL13AP3Q6NVV1 102 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 ZFPM1Q8IX07 1006 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 OR2M4Q96R27 311 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 NIFKQ9BYG3 293 aaKnown RBP5.82□□□□□ -1.48
VPS13B-203ENST00000358544 KNDC1Q76NI1 1749 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 CNR2P34972 360 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 RPIAP49247 311 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 SSTP61278 116 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 CTU2Q2VPK5 515 aaKnown RBP5.82□□□□□ -1.48
VPS13B-203ENST00000358544 TREML2Q5T2D2 321 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 DNAJC5GQ8N7S2 189 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 GRHL3Q8TE85 626 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 ZDHHC1Q8WTX9 485 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 ACOT11Q8WXI4 607 aaPredicted RBP5.82□□□□□ -1.48
VPS13B-203ENST00000358544 ZNF419Q96HQ0 510 aaPredicted RBP5.82□□□□□ -1.48
VPS13B-203ENST00000358544 POT1Q9NUX5 634 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 HAS3O00219 553 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 HPGDSO60760 199 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 GJB1P08034 283 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 EDNRBP24530 442 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 OR1E2P47887 323 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 RPS26P62854 115 aaKnown RBP5.82□□□□□ -1.48
VPS13B-203ENST00000358544 TNFRSF17Q02223 184 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 TRAM2Q15035 370 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 MICAQ29983 383 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 FAM69AQ5T7M9 428 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 DPPA2Q7Z7J5 298 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 GPR26Q8NDV2 337 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 XYLT2Q9H1B5 865 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 CTPS2Q9NRF8 586 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 DERAQ9Y315 318 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 A0A1B0GV50 99 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 CLDN5O00501 218 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 ARHGAP33O14559 1287 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 ACOT8O14734 319 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 OR10H2O60403 315 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 RNF151Q2KHN1 245 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 OR6V1Q8N148 313 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 LRRC52Q8N7C0 313 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 TEX19Q8NA77 164 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 ZBED6CLQ96FA7 236 aaPredicted RBP5.82□□□□□ -1.48
VPS13B-203ENST00000358544 NOX3Q9HBY0 568 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 MAFFQ9ULX9 164 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 PCDHAC2Q9Y5I4 1007 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 DNAJC15Q9Y5T4 150 aa5.82□□□□□ -1.48
VPS13B-203ENST00000358544 ZNF670-ZNF695F2Z2N8 137 aa5.81□□□□□ -1.48
VPS13B-203ENST00000358544 ATG13O75143 517 aa5.81□□□□□ -1.48
VPS13B-203ENST00000358544 ELFN1P0C7U0 828 aa5.81□□□□□ -1.48
VPS13B-203ENST00000358544 ALPPL2P10696 532 aa5.81□□□□□ -1.48
VPS13B-203ENST00000358544 VEGFCP49767 419 aa5.81□□□□□ -1.48
VPS13B-203ENST00000358544 ACTBP60709 375 aa5.81□□□□□ -1.48
VPS13B-203ENST00000358544 ACTG1P63261 375 aa5.81□□□□□ -1.48
VPS13B-203ENST00000358544 CHRNEQ04844 493 aa5.81□□□□□ -1.48
VPS13B-203ENST00000358544 C3orf38Q5JPI3 329 aa5.81□□□□□ -1.48
VPS13B-203ENST00000358544 DBF4BQ8NFT6 615 aa5.81□□□□□ -1.48
VPS13B-203ENST00000358544 SLC6A7Q99884 636 aa5.81□□□□□ -1.48
VPS13B-203ENST00000358544 MKKSQ9NPJ1 570 aaPredicted RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms