RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 SEC23BQ15437 767 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 GGTA1PQ4G0N0 100 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 FNDC3BQ53EP0 1204 aaKnown RBP6.24□□□□□ -1.41
CSDE1-203ENST00000358528 ARTNQ5T4W7 220 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 BCL2L15Q5TBC7 163 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 PODNL1Q6PEZ8 512 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 BRAT1Q6PJG6 821 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.24□□□□□ -1.417e-9■■■□□ 18.5
CSDE1-203ENST00000358528 CCDC116Q8IYX3 515 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 KLK6Q92876 244 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 UBE2E3Q969T4 207 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 RAD51AP1Q96B01 352 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 FAM46AQ96IP4 442 aaKnown RBP6.24□□□□□ -1.41
CSDE1-203ENST00000358528 SNX18Q96RF0 628 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 SECISBP2Q96T21 854 aaKnown RBP6.24□□□□□ -1.41
CSDE1-203ENST00000358528 NRTNQ99748 197 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 ZCCHC2Q9C0B9 1178 aaKnown RBP6.24□□□□□ -1.41
CSDE1-203ENST00000358528 PPIL3Q9H2H8 161 aaKnown RBP6.24□□□□□ -1.41
CSDE1-203ENST00000358528 OR51I1Q9H343 314 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 ASAH2Q9NR71 780 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 HCN2Q9UL51 889 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 NDRG2Q9UN36 371 aaKnown RBP6.24□□□□□ -1.41
CSDE1-203ENST00000358528 ENTPD4Q9Y227 616 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 ALG5Q9Y673 324 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 BPTFQ12830 3046 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 TRBV23OR9-2A0A075B6M9 112 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 LOC105369274A0A096LPK9 316 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 EEF1E1O43324 174 aaKnown RBP6.24□□□□□ -1.41
CSDE1-203ENST00000358528 LYRM1O43325 122 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 LATO43561 262 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 MMP20O60882 483 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 SCN2BO60939 215 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 ADAP00813 363 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 CLTBP09497 229 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 TYRP14679 529 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 UQCRC2P22695 453 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 CTGFP29279 349 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 ETV5P41161 510 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 WASP42768 502 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 ETV1P50549 477 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 RPL6Q02878 288 aaKnown RBP6.24□□□□□ -1.41
CSDE1-203ENST00000358528 SREBF2Q12772 1141 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 GPR19Q15760 415 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 BCL2A1Q16548 175 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 LY6G5CQ5SRR4 150 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 CDC73Q6P1J9 531 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 ZNF783Q6ZMS7 281 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 PHC2Q8IXK0 858 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 OR4N4Q8N0Y3 316 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 CBARPQ8N350 705 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-203ENST00000358528 SAMD12Q8N8I0 201 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 KIAA1958Q8N8K9 716 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 TP53I13Q8NBR0 393 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-203ENST00000358528 BEST4Q8NFU0 473 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 LRRC20Q8TCA0 184 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 TRMT61AQ96FX7 289 aaKnown RBP6.24□□□□□ -1.41
CSDE1-203ENST00000358528 IGSF21Q96ID5 467 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 AIF1LQ9BQI0 150 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 BARHL1Q9BZE3 327 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 XKR8Q9H6D3 395 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 DMRT3Q9NQL9 472 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 PLCXD1Q9NUJ7 323 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 CNOT2Q9NZN8 540 aaKnown RBP6.24□□□□□ -1.41
CSDE1-203ENST00000358528 MRPL15Q9P015 296 aaKnown RBP6.24□□□□□ -1.41
CSDE1-203ENST00000358528 PCDHGB2Q9Y5G2 931 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 CSNK1G3Q9Y6M4 447 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 DOCK4Q8N1I0 1966 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 WDR90Q96KV7 1748 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 KCNE1BA0A087WTH5 132 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 A0A1W2PQ45 241 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-203ENST00000358528 A0A1W2PQY0 241 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 ZNF670-ZNF695F2Z2N8 137 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 H3BSH0 61 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 QSOX1O00391 747 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 TSPAN4O14817 238 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 ARHGEF15O94989 841 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 CRYZL1O95825 349 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 C8AP07357 584 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 FURINP09958 794 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 ARAFP10398 606 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 PRG2P13727 222 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 PSMB5P28074 263 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 IFNGR2P38484 337 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 MTNR1AP48039 350 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 LIM2P55344 173 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 ABATP80404 500 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 MRPL58Q14197 206 aaKnown RBP6.24□□□□□ -1.41
CSDE1-203ENST00000358528 ZNF267Q14586 743 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-203ENST00000358528 INSL4Q14641 139 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 ZDHHC20Q5W0Z9 365 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 XKRXQ6PP77 449 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 LYPD8Q6UX82 237 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 VN1R5Q7Z5H4 357 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 METTL3Q86U44 580 aaKnown RBP6.24□□□□□ -1.41
CSDE1-203ENST00000358528 OR9A1PQ8NGU1 263 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 SLC7A13Q8TCU3 470 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 ZNF431Q8TF32 576 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-203ENST00000358528 ZBED6CLQ96FA7 236 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-203ENST00000358528 CCDC120Q96HB5 630 aa6.24□□□□□ -1.41
CSDE1-203ENST00000358528 ST6GAL2Q96JF0 529 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms