RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 C6P13671 934 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 IL1RNP18510 177 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 RPL4P36578 427 aaKnown RBP6.49□□□□□ -1.37
RTN4-203ENST00000357376 RPS19P39019 145 aaKnown RBP6.49□□□□□ -1.37
RTN4-203ENST00000357376 MAP2K3P46734 347 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 ID2Q02363 134 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 SNAP47Q5SQN1 464 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 SLC30A6Q6NXT4 461 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 FAHD1Q6P587 224 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 SLC36A4Q6YBV0 504 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 HTR3DQ70Z44 454 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 CXXC5Q7LFL8 322 aaKnown RBP6.49□□□□□ -1.37
RTN4-203ENST00000357376 LRRTM4Q86VH4 590 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 TIGD4Q8IY51 512 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 ZNF433Q8N7K0 673 aaPredicted RBP6.49□□□□□ -1.37
RTN4-203ENST00000357376 SLAIN1Q8ND83 568 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 OR52E4Q8NGH9 312 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 OR8K5Q8NH50 307 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 PIGKQ92643 395 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 CXorf40BQ96DE9 158 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 FAM46AQ96IP4 442 aaKnown RBP6.49□□□□□ -1.37
RTN4-203ENST00000357376 NEDD4LQ96PU5 975 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 SECISBP2Q96T21 854 aaKnown RBP6.49□□□□□ -1.37
RTN4-203ENST00000357376 CCDC3Q9BQI4 270 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 MRPS30Q9NP92 439 aaKnown RBP6.49□□□□□ -1.37
RTN4-203ENST00000357376 MCUBQ9NWR8 336 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 ZNF226Q9NYT6 803 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 ING4Q9UNL4 249 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 ZFR2Q9UPR6 939 aaKnown RBP6.49□□□□□ -1.37
RTN4-203ENST00000357376 C2orf92A0A1B0GVN3 265 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 A0A1W2PPK0 400 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 GFYI3L273 518 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 YY2O15391 372 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 SLC31A1O15431 190 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 STX11O75558 287 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 HLA-DPB1P04440 258 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 RHOP08100 348 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 CSNK2A2P19784 350 aaPredicted RBP6.49□□□□□ -1.37
RTN4-203ENST00000357376 MTNR1AP48039 350 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 SLC9A3P48764 834 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 WNT3P56703 355 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 DEFB103AP81534 67 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 BTBD16Q32M84 506 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 KHDRBS2Q5VWX1 349 aaKnown RBP6.49□□□□□ -1.37
RTN4-203ENST00000357376 PARS2Q7L3T8 475 aaKnown RBP6.49□□□□□ -1.37
RTN4-203ENST00000357376 CDH24Q86UP0 819 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 KLBQ86Z14 1044 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 SLC37A3Q8NCC5 494 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 GRPEL2Q8TAA5 225 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 OR4K3Q96R72 315 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 IFT27Q9BW83 186 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 PRR14Q9BWN1 585 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 RANGRFQ9HD47 186 aaPredicted RBP6.49□□□□□ -1.37
RTN4-203ENST00000357376 ACER3Q9NUN7 267 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 TMEM184CQ9NVA4 438 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 SPATA6Q9NWH7 488 aaPredicted RBP6.49□□□□□ -1.37
RTN4-203ENST00000357376 CUEDC1Q9NWM3 386 aaPredicted RBP6.49□□□□□ -1.37
RTN4-203ENST00000357376 HS3ST2Q9Y278 367 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 PCDHGB1Q9Y5G3 927 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 PCDHGA2Q9Y5H1 932 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 SDK1Q7Z5N4 2213 aa6.49□□□□□ -1.37
RTN4-203ENST00000357376 TRBV5-3A0A0A0MS03 114 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 A0A1W2PQ72 361 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 FAM86C2PA6NEL3 165 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 FAM47E-STBD1D6RA91 191 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 KMOO15229 486 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 SSX4O60224 188 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 GPX5O75715 221 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 GSTM3P21266 225 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 TLX1P31314 330 aaPredicted RBP6.48□□□□□ -1.37
RTN4-203ENST00000357376 UGT2B10P36537 528 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 DCDC1P59894 354 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 TAP2Q03519 686 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 LRRC32Q14392 662 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 LARS2Q15031 903 aaKnown RBP6.48□□□□□ -1.37
RTN4-203ENST00000357376 ZMAT1Q5H9K5 638 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 MFSD4BQ5TF39 518 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 LAIR1Q6GTX8 287 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 LAIR2Q6ISS4 152 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 PODNL1Q6PEZ8 512 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 B3GLCTQ6Y288 498 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 RNF44Q7L0R7 432 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 FGD2Q7Z6J4 655 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 IZUMO1Q8IYV9 350 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 PGBD3Q8N328 593 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 KCT2Q8NC54 265 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 FAM98AQ8NCA5 519 aaKnown RBP6.48□□□□□ -1.37
RTN4-203ENST00000357376 WDR20Q8TBZ3 569 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 CHTF18Q8WVB6 975 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 POF1BQ8WVV4 589 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 C7orf34Q96L11 122 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 CNOT2Q9NZN8 540 aaKnown RBP6.48□□□□□ -1.37
RTN4-203ENST00000357376 EXTL2Q9UBQ6 330 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 HCN2Q9UL51 889 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 SNX11Q9Y5W9 270 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 FAM172BPA6NC97 362 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 LRRC72A6NJI9 287 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 PRAMEF4O60810 478 aa6.48□□□□□ -1.37
RTN4-203ENST00000357376 PRKRAO75569 313 aaKnown RBP6.48□□□□□ -1.37
RTN4-203ENST00000357376 ABLIM3O94929 683 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms