RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 C7orf34Q96L11 122 aa13.06□□□□□ -0.32
LSS-201ENST00000356396 DDX31Q9H8H2 851 aaKnown RBP13.06□□□□□ -0.32
LSS-201ENST00000356396 TRNAU1APQ9NX07 287 aaKnown RBP13.06□□□□□ -0.32
LSS-201ENST00000356396 DNAJB9Q9UBS3 223 aa13.06□□□□□ -0.32
LSS-201ENST00000356396 AP1M2Q9Y6Q5 423 aa13.06□□□□□ -0.32
LSS-201ENST00000356396 KPNA4O00629 521 aaPredicted RBP13.05□□□□□ -0.32
LSS-201ENST00000356396 PROM1O43490 865 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 IGFBP5P24593 272 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 SSTR4P31391 388 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 RYKP34925 604 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 MAP2K4P45985 399 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 MRPL19P49406 292 aaKnown RBP13.05□□□□□ -0.32
LSS-201ENST00000356396 PCBP4P57723 403 aaKnown RBP13.05□□□□□ -0.32
LSS-201ENST00000356396 CD47Q08722 323 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 SLC36A3Q495N2 470 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 B3GLCTQ6Y288 498 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 C16orf47Q6ZP98 133 aaPredicted RBP13.05□□□□□ -0.32
LSS-201ENST00000356396 DCP2Q8IU60 420 aaKnown RBP13.05□□□□□ -0.32
LSS-201ENST00000356396 CCDC71Q8IV32 467 aaPredicted RBP13.05□□□□□ -0.32
LSS-201ENST00000356396 OR52N2Q8NGI0 321 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 SCARF2Q96GP6 870 aaPredicted RBP13.05□□□□□ -0.32
LSS-201ENST00000356396 MAGEB10Q96LZ2 347 aaPredicted RBP13.05□□□□□ -0.32
LSS-201ENST00000356396 ZFYVE21Q9BQ24 234 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 NUDT22Q9BRQ3 303 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 GSDMCQ9BYG8 508 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 ROGDIQ9GZN7 287 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 NRSN2Q9GZP1 204 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 RAD21L1Q9H4I0 556 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 IL1RAPQ9NPH3 570 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 FAM118AQ9NWS6 357 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 SPATA7Q9P0W8 599 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 BTNL2Q9UIR0 455 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 RAB26Q9ULW5 256 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 TGFBR3LH3BV60 316 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 DENRO43583 198 aaKnown RBP13.05□□□□□ -0.32
LSS-201ENST00000356396 CLEC3AO75596 197 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 UBXN7O94888 489 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 NPPAP01160 153 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 PCSK2P16519 638 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 SOX18P35713 384 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 SEC23BQ15437 767 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 CBLL1Q75N03 491 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 GPR155Q7Z3F1 870 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 SPRED1Q7Z699 444 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 ST13P4Q8IZP2 240 aaPredicted RBP13.05□□□□□ -0.32
LSS-201ENST00000356396 EID3Q8N140 333 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 GHDCQ8N2G8 530 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 SLC25A45Q8N413 288 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 ZNF321PQ8N8H1 164 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 RERGQ96A58 199 aaPredicted RBP13.05□□□□□ -0.32
LSS-201ENST00000356396 OSBPL11Q9BXB4 747 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 LRIT1Q9P2V4 623 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 SEC14L3Q9UDX4 400 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 SCML1Q9UN30 329 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 DNMT3AQ9Y6K1 912 aaPredicted RBP13.05□□□□□ -0.32
LSS-201ENST00000356396 CPSF4LA6NMK7 179 aaKnown RBP13.05□□□□□ -0.32
LSS-201ENST00000356396 METTL12A8MUP2 240 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 MASP2O00187 686 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 PDX1P52945 283 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 DPY19L1Q2PZI1 675 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 ARMC6Q6NXE6 501 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 TTLL10Q6ZVT0 673 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 R3HCC1LQ7Z5L2 792 aaKnown RBP13.05□□□□□ -0.32
LSS-201ENST00000356396 CLIP4Q8N3C7 705 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 NUP43Q8NFH3 380 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 MMABQ96EY8 250 aaPredicted RBP13.05□□□□□ -0.32
LSS-201ENST00000356396 SLC35G5Q96KT7 338 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 BTBD9Q96Q07 612 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 IL4I1Q96RQ9 567 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 RERGLQ9H628 205 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 C11orf16Q9NQ32 467 aa13.05□□□□□ -0.32
LSS-201ENST00000356396 PAK1IP1Q9NWT1 392 aaPredicted RBP13.05□□□□□ -0.32
LSS-201ENST00000356396 IGHV3-20A0A0C4DH32 117 aa13.04□□□□□ -0.32
LSS-201ENST00000356396 TNFRSF11BO00300 401 aa13.04□□□□□ -0.32
LSS-201ENST00000356396 PEX12O00623 359 aa13.04□□□□□ -0.32
LSS-201ENST00000356396 FESP07332 822 aa13.04□□□□□ -0.32
LSS-201ENST00000356396 CXCL12P48061 93 aa13.04□□□□□ -0.32
LSS-201ENST00000356396 ALDH3A2P51648 485 aa13.04□□□□□ -0.32
LSS-201ENST00000356396 CFHR1Q03591 330 aa13.04□□□□□ -0.32
LSS-201ENST00000356396 SLC13A2Q13183 592 aa13.04□□□□□ -0.32
LSS-201ENST00000356396 MINDY4Q4G0A6 757 aa13.04□□□□□ -0.32
LSS-201ENST00000356396 IQCCQ4KMZ1 466 aa13.04□□□□□ -0.32
LSS-201ENST00000356396 LIN52Q52LA3 116 aa13.04□□□□□ -0.32
LSS-201ENST00000356396 LAIR2Q6ISS4 152 aa13.04□□□□□ -0.32
LSS-201ENST00000356396 RP1L1Q8IWN7 2480 aaPredicted RBP13.04□□□□□ -0.32
LSS-201ENST00000356396 THAP3Q8WTV1 239 aaPredicted RBP13.04□□□□□ -0.32
LSS-201ENST00000356396 CNPPD1Q9BV87 410 aa13.04□□□□□ -0.32
LSS-201ENST00000356396 REEP1Q9H902 201 aa13.04□□□□□ -0.32
LSS-201ENST00000356396 ENTPD4Q9Y227 616 aa13.04□□□□□ -0.32
LSS-201ENST00000356396 OR2A25A4D2G3 310 aa13.04□□□□□ -0.32
LSS-201ENST00000356396 EPPINO95925 133 aa13.04□□□□□ -0.32
LSS-201ENST00000356396 NR2F6P10588 404 aa13.04□□□□□ -0.32
LSS-201ENST00000356396 PRG2P13727 222 aa13.04□□□□□ -0.32
LSS-201ENST00000356396 TCEA1P23193 301 aaKnown RBP13.04□□□□□ -0.32
LSS-201ENST00000356396 CAPGP40121 348 aa13.04□□□□□ -0.32
LSS-201ENST00000356396 CLK3P49761 638 aaKnown RBP13.04□□□□□ -0.32
LSS-201ENST00000356396 SELENOWP63302 87 aa13.04□□□□□ -0.32
LSS-201ENST00000356396 EIF3MQ7L2H7 374 aaKnown RBP13.04□□□□□ -0.32
LSS-201ENST00000356396 PRR22Q8IZ63 422 aa13.04□□□□□ -0.32
LSS-201ENST00000356396 KIAA1958Q8N8K9 716 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms