RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 YARS2Q9Y2Z4 477 aaKnown RBP12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 OIP5O43482 229 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 OR8U9P0C7N5 309 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 MPC1LP0DKB6 136 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 GGT2P36268 569 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 ETV1P50549 477 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 SH3BP2P78314 561 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 TBCEQ15813 527 aaPredicted RBP12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 TREML2Q5T2D2 321 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 C9orf131Q5VYM1 1079 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 STK35Q8TDR2 534 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 MUL1Q969V5 352 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 FAM46BQ96A09 425 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 SEC61A2Q9H9S3 476 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 WASF3Q9UPY6 502 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 SCML2Q9UQR0 700 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 ENPP4Q9Y6X5 453 aa12.17□□□□□ -0.46
SYNCRIP-201ENST00000355238 H3BSH0 61 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 AMY2AP04746 511 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 FGF4P08620 206 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 TPT1P13693 172 aaKnown RBP12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 AMY2BP19961 511 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 DLSTP36957 453 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 DEFA6Q01524 100 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 LRP8Q14114 963 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.16□□□□□ -0.469e-7■■■■■ 34.3
SYNCRIP-201ENST00000355238 ZNF691Q5VV52 312 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 KCTD20Q7Z5Y7 419 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 C12orf40Q86WS4 652 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 WDSUB1Q8N9V3 476 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 WFIKKN2Q8TEU8 576 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 IMP4Q96G21 291 aaKnown RBP12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 DHRS4Q9BTZ2 278 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 ACTL8Q9H568 366 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 JUPP14923 745 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 GNRHRP30968 328 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 DECR1Q16698 335 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 SMARCD2Q92925 531 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 MOCOSQ96EN8 888 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 SORT1Q99523 831 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 DPH2Q9BQC3 489 aaPredicted RBP12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 EPHA6Q9UF33 1036 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 CAPNS1P04632 268 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 UBBP0CG47 229 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 UBCP0CG48 685 aaKnown RBP12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 RPS27AP62979 156 aaKnown RBP12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 UBA52P62987 128 aaKnown RBP12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 RAB11BQ15907 218 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 LRRTM4Q86VH4 590 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 TERB2Q8NHR7 220 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 NETO1Q8TDF5 533 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 SDHAF3Q9NRP4 125 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 ZNF226Q9NYT6 803 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 KLHL21Q9UJP4 597 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 MYH8P13535 1937 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 TNFRSF10AO00220 468 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 BEST1O76090 585 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 AHSA1O95433 338 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 UGT2B7P16662 529 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 TNFSF8P32971 234 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 ESCO2Q56NI9 601 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 MRGPRX2Q96LB1 330 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 NELFAQ9H3P2 528 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 ICMTO60725 284 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 MTX2O75431 263 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 EOMESO95936 686 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 PROS1P07225 676 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 ZNF783Q6ZMS7 281 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 AUTS2Q8WXX7 1259 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 IL12RB2Q99665 862 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 CRTAC1Q9NQ79 661 aa12.16□□□□□ -0.46
SYNCRIP-201ENST00000355238 SCAMP2O15127 329 aaKnown RBP12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 DDNO94850 711 aaPredicted RBP12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 LATS1O95835 1130 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 SEMG2Q02383 582 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 SPATC1Q76KD6 591 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 OR4C15Q8NGM1 316 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 RANGRFQ9HD47 186 aaPredicted RBP12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 IL36AQ9UHA7 158 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 AP1M2Q9Y6Q5 423 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 CSF1P09603 554 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 AKR1C4P17516 323 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 CTNNB1P35222 781 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 CDKN2DP55273 166 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 DYRK1AQ13627 763 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 LRRC73Q5JTD7 316 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 DPY19L2P1Q6NXN4 242 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 GPAT4Q86UL3 456 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 DCUN1D3Q8IWE4 304 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 OR52N2Q8NGI0 321 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 NT5C3BQ969T7 300 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 RBP7Q96R05 134 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 GORASP2Q9H8Y8 452 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 KCNJ16Q9NPI9 418 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 DCAF13Q9NV06 445 aaKnown RBP12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 TMEM131LA2VDJ0 1609 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 PHYHO14832 338 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 NAA10P41227 235 aaPredicted RBP12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 INHBCP55103 352 aa12.15□□□□□ -0.46
SYNCRIP-201ENST00000355238 DLX5P56178 289 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms