RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 IFNA7P01567 189 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 ANXA4P09525 319 aaPredicted RBP8.92□□□□□ -0.98
SMG6-202ENST00000354901 TRAPPC2P0DI81 140 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 TRAPPC2BP0DI82 140 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 JUNDP17535 347 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 ACVR2AP27037 513 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 SPINT3P49223 89 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 DCDC1P59894 354 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 PFN3P60673 137 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 MEF2AQ02078 507 aaPredicted RBP8.92□□□□□ -0.98
SMG6-202ENST00000354901 NPRL3Q12980 569 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 TNK1Q13470 666 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 GRK1Q15835 563 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 SYTL3Q4VX76 610 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 MPPE1Q53F39 396 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 SLC35F1Q5T1Q4 408 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 ALKBH2Q6NS38 261 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 MZT2BQ6NZ67 158 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 PTOV1Q86YD1 416 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 Q8N402 240 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 C2orf73Q8N5S3 287 aaPredicted RBP8.92□□□□□ -0.98
SMG6-202ENST00000354901 SRFBP1Q8NEF9 429 aaKnown RBP8.92□□□□□ -0.98
SMG6-202ENST00000354901 IPCEF1Q8WWN9 437 aaPredicted RBP8.92□□□□□ -0.98
SMG6-202ENST00000354901 FCGR1BQ92637 280 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 REPS1Q96D71 796 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 MAGIXQ9H6Y5 334 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 SGK2Q9HBY8 427 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 NKIRAS2Q9NYR9 191 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 SPASTQ9UBP0 616 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 KLHL21Q9UJP4 597 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 SLC6A14Q9UN76 642 aa8.92□□□□□ -0.98
SMG6-202ENST00000354901 A0A1W2PPL8 197 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 LINC00862A6NCI5 91 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 MGAT4DA6NG13 374 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 HPGDSO60760 199 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 PRPS1L1P21108 318 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 DNAJA1P31689 397 aaKnown RBP8.91□□□□□ -0.98
SMG6-202ENST00000354901 MAPK8P45983 427 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 GBX2P52951 348 aaPredicted RBP8.91□□□□□ -0.98
SMG6-202ENST00000354901 CSTF1Q05048 431 aaKnown RBP8.91□□□□□ -0.98
SMG6-202ENST00000354901 LIPKQ5VXJ0 399 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 TPGS2Q68CL5 300 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 ASTLQ6HA08 431 aaPredicted RBP8.91□□□□□ -0.98
SMG6-202ENST00000354901 C22orf42Q6IC83 251 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 HSD11B1LQ7Z5J1 315 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 THOC6Q86W42 341 aaKnown RBP8.91□□□□□ -0.98
SMG6-202ENST00000354901 BOLLQ8N9W6 283 aaKnown RBP8.91□□□□□ -0.98
SMG6-202ENST00000354901 OR5AK3PQ8NH89 298 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 SMG7Q92540 1137 aaKnown RBP8.91□□□□□ -0.98
SMG6-202ENST00000354901 TRMT2BQ96GJ1 504 aaKnown RBP8.91□□□□□ -0.98
SMG6-202ENST00000354901 DUSP26Q9BV47 211 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 RIOK2Q9BVS4 552 aaKnown RBP8.91□□□□□ -0.98
SMG6-202ENST00000354901 HCFC1R1Q9NWW0 138 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 PRKAG2Q9UGJ0 569 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 ACSL6Q9UKU0 697 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 KIAA0100Q14667 2235 aaKnown RBP8.91□□□□□ -0.98
SMG6-202ENST00000354901 OR5K4A6NMS3 321 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 ARHGEF33A8MVX0 844 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 KPNA5O15131 536 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 TSPAN6O43657 245 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 PCDH7O60245 1069 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 RAF1P04049 648 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 C8GP07360 202 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 FPR1P21462 350 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 HOXA9P31269 272 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 RECQLP46063 649 aaPredicted RBP8.91□□□□□ -0.98
SMG6-202ENST00000354901 HNMTP50135 292 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 CTSCP53634 463 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 WNT3P56703 355 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 ZNF852Q6ZMS4 543 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 TMPRSS11BQ86T26 416 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 RDH10Q8IZV5 341 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 NAGSQ8N159 534 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 CRIPAKQ8N1N5 446 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 CBARPQ8N350 705 aaPredicted RBP8.91□□□□□ -0.98
SMG6-202ENST00000354901 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.91□□□□□ -0.98
SMG6-202ENST00000354901 NANPQ8TBE9 248 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 APH1BQ8WW43 257 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 ZNF566Q969W8 418 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 GTPBP3Q969Y2 492 aaKnown RBP8.91□□□□□ -0.98
SMG6-202ENST00000354901 ZNF558Q96NG5 402 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 ZNF624Q9P2J8 865 aaPredicted RBP8.91□□□□□ -0.98
SMG6-202ENST00000354901 CLEC4AQ9UMR7 237 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 NCKAP1Q9Y2A7 1128 aa8.91□□□□□ -0.98
SMG6-202ENST00000354901 GABRR3A8MPY1 467 aa8.9□□□□□ -0.98
SMG6-202ENST00000354901 LEFTY2O00292 366 aa8.9□□□□□ -0.98
SMG6-202ENST00000354901 SLC16A8O95907 504 aa8.9□□□□□ -0.98
SMG6-202ENST00000354901 ALPPP05187 535 aa8.9□□□□□ -0.98
SMG6-202ENST00000354901 CCL5P13501 91 aa8.9□□□□□ -0.98
SMG6-202ENST00000354901 JUPP14923 745 aa8.9□□□□□ -0.98
SMG6-202ENST00000354901 XPAP23025 273 aaPredicted RBP8.9□□□□□ -0.98
SMG6-202ENST00000354901 SLC6A12P48065 614 aa8.9□□□□□ -0.98
SMG6-202ENST00000354901 MAZP56270 477 aaKnown RBP8.9□□□□□ -0.98
SMG6-202ENST00000354901 GAB1Q13480 694 aa8.9□□□□□ -0.98
SMG6-202ENST00000354901 PROX2Q3B8N5 592 aa8.9□□□□□ -0.98
SMG6-202ENST00000354901 TIMM50Q3ZCQ8 353 aa8.9□□□□□ -0.98
SMG6-202ENST00000354901 DDI2Q5TDH0 399 aa8.9□□□□□ -0.98
SMG6-202ENST00000354901 KDM4DQ6B0I6 523 aa8.9□□□□□ -0.98
SMG6-202ENST00000354901 AGTRAPQ6RW13 159 aa8.9□□□□□ -0.98
SMG6-202ENST00000354901 OR11H4Q8NGC9 324 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms