RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 EFTUD2Q15029 972 aaKnown RBP eCLIP14.46□□□□□ -0.092e-11■■■■■ 32.6
DDX55-202ENST00000354291 TGFBIQ15582 683 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 CHRFAM7AQ494W8 412 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 EIPR1Q53HC9 387 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 CDKL4Q5MAI5 379 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 WIPI1Q5MNZ9 446 aaPredicted RBP14.46□□□□□ -0.09
DDX55-202ENST00000354291 PLXDC2Q6UX71 529 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 C3orf62Q6ZUJ4 267 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 GCNT2Q8N0V5 402 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 KRT78Q8N1N4 520 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 TCAIMQ8N3R3 496 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 TMEM171Q8WVE6 324 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 DIO2Q92813 273 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 MS4A6EQ96DS6 147 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 SENP5Q96HI0 755 aaPredicted RBP14.46□□□□□ -0.09
DDX55-202ENST00000354291 HS3ST6Q96QI5 342 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 PITHD1Q9GZP4 211 aaPredicted RBP14.46□□□□□ -0.09
DDX55-202ENST00000354291 CNOT10Q9H9A5 744 aaKnown RBP14.46□□□□□ -0.09
DDX55-202ENST00000354291 SMYD2Q9NRG4 433 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 CNOT11Q9UKZ1 510 aaKnown RBP14.46□□□□□ -0.09
DDX55-202ENST00000354291 UTP11Q9Y3A2 253 aaKnown RBP14.46□□□□□ -0.09
DDX55-202ENST00000354291 WIF1Q9Y5W5 379 aa14.46□□□□□ -0.09
DDX55-202ENST00000354291 MED12Q93074 2177 aa14.46□□□□□ -0.1
DDX55-202ENST00000354291 A0A088AWK7 358 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 LRIT2A6NDA9 550 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 RAD51CO43502 376 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 WIPF1O43516 503 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 TRIM3O75382 744 aaPredicted RBP14.45□□□□□ -0.1
DDX55-202ENST00000354291 PIAS1O75925 651 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 RCBTB2O95199 551 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 HPNP05981 417 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 CCDC166P0CW27 439 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 STMN1P16949 149 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 ZNF10P21506 573 aaPredicted RBP14.45□□□□□ -0.1
DDX55-202ENST00000354291 HPDP32754 393 aaPredicted RBP14.45□□□□□ -0.1
DDX55-202ENST00000354291 SOX18P35713 384 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 GGT5P36269 586 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 GDF5P43026 501 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 SLC6A12P48065 614 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 ATP6V0D1P61421 351 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 CAV1Q03135 178 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 VEZF1Q14119 521 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 SERTAD2Q14140 314 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 RCN2Q14257 317 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.45□□□□□ -0.13e-7■■■■■ 27.9
DDX55-202ENST00000354291 TMIGD1Q6UXZ0 262 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 SLCO4C1Q6ZQN7 724 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 GPSM1Q86YR5 675 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 C9orf40Q8IXQ3 194 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 SLC15A4Q8N697 577 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 NUBPLQ8TB37 319 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 ZPLD1Q8TCW7 415 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 DOK4Q8TEW6 326 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 ZC3HAV1LQ96H79 300 aaKnown RBP14.45□□□□□ -0.1
DDX55-202ENST00000354291 QRFPRQ96P65 431 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 FAM111AQ96PZ2 611 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 TM9SF2Q99805 663 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 PIGMQ9H3S5 423 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 GPRC5BQ9NZH0 403 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 DAPP1Q9UN19 280 aa14.45□□□□□ -0.1
DDX55-202ENST00000354291 TCRBV9S1A1TA0A576 114 aa14.44□□□□□ -0.1
DDX55-202ENST00000354291 NCF1BA6NI72 391 aaPredicted RBP14.44□□□□□ -0.1
DDX55-202ENST00000354291 FAM159BA6NKW6 160 aa14.44□□□□□ -0.1
DDX55-202ENST00000354291 NCF1CA8MVU1 366 aaPredicted RBP14.44□□□□□ -0.1
DDX55-202ENST00000354291 CXorf49A8MYA2 514 aaPredicted RBP14.44□□□□□ -0.1
DDX55-202ENST00000354291 TLX2O43763 284 aaPredicted RBP14.44□□□□□ -0.1
DDX55-202ENST00000354291 WISP3O95389 354 aaPredicted RBP14.44□□□□□ -0.1
DDX55-202ENST00000354291 FBXO45P0C2W1 286 aa14.44□□□□□ -0.1
DDX55-202ENST00000354291 NCF1P14598 390 aaPredicted RBP14.44□□□□□ -0.1
DDX55-202ENST00000354291 CRYGSP22914 178 aa14.44□□□□□ -0.1
DDX55-202ENST00000354291 CERS1P27544 350 aa14.44□□□□□ -0.1
DDX55-202ENST00000354291 CASQ1P31415 396 aa14.44□□□□□ -0.1
DDX55-202ENST00000354291 GP5P40197 560 aa14.44□□□□□ -0.1
DDX55-202ENST00000354291 MASP1P48740 699 aa14.44□□□□□ -0.1
DDX55-202ENST00000354291 SRYQ05066 204 aa14.44□□□□□ -0.1
DDX55-202ENST00000354291 CLEC12BQ2HXU8 276 aa14.44□□□□□ -0.1
DDX55-202ENST00000354291 C18orf21Q32NC0 220 aaPredicted RBP14.44□□□□□ -0.1
DDX55-202ENST00000354291 NHSL2Q5HYW2 709 aa14.44□□□□□ -0.1
DDX55-202ENST00000354291 BICRALQ6AI39 1079 aa14.44□□□□□ -0.1
DDX55-202ENST00000354291 SULT1C3Q6IMI6 304 aa14.44□□□□□ -0.1
DDX55-202ENST00000354291 NTNG2Q96CW9 530 aa14.44□□□□□ -0.1
DDX55-202ENST00000354291 GAL3ST4Q96RP7 486 aa14.44□□□□□ -0.1
DDX55-202ENST00000354291 SERINC2Q96SA4 455 aa14.44□□□□□ -0.1
DDX55-202ENST00000354291 GPR22Q99680 433 aa14.44□□□□□ -0.1
DDX55-202ENST00000354291 RBBP8Q99708 897 aa14.44□□□□□ -0.1
DDX55-202ENST00000354291 TUBA1CQ9BQE3 449 aa14.44□□□□□ -0.1
DDX55-202ENST00000354291 PHACTR1Q9C0D0 580 aa14.44□□□□□ -0.1
DDX55-202ENST00000354291 EHD1Q9H4M9 534 aa14.44□□□□□ -0.1
DDX55-202ENST00000354291 CXorf56Q9H5V9 222 aa14.44□□□□□ -0.1
DDX55-202ENST00000354291 NT5DC2Q9H857 520 aa14.44□□□□□ -0.1
DDX55-202ENST00000354291 CAB39LQ9H9S4 337 aa14.44□□□□□ -0.1
DDX55-202ENST00000354291 GRHL1Q9NZI5 618 aa14.44□□□□□ -0.1
DDX55-202ENST00000354291 ANKDD1BA6NHY2 528 aa14.43□□□□□ -0.1
DDX55-202ENST00000354291 HRKO00198 91 aa14.43□□□□□ -0.1
DDX55-202ENST00000354291 CLGNO14967 610 aa14.43□□□□□ -0.1
DDX55-202ENST00000354291 STK16O75716 305 aa14.43□□□□□ -0.1
DDX55-202ENST00000354291 SMNDC1O75940 238 aaKnown RBP eCLIP14.43□□□□□ -0.1
DDX55-202ENST00000354291 COX7A2P14406 83 aa14.43□□□□□ -0.1
DDX55-202ENST00000354291 CD1DP15813 335 aa14.43□□□□□ -0.1
DDX55-202ENST00000354291 SPRP35270 261 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms