RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 PEX16Q9Y5Y5 336 aa8.16□□□□□ -1.1
TRIM55-204ENST00000353317 PI4KAP42356 2102 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 TRBV23OR9-2A0A075B6M9 112 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 PI15O43692 258 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 CELA2BP08218 269 aaPredicted RBP8.15□□□□□ -1.1
TRIM55-204ENST00000353317 ETFAP13804 333 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 ANXA8P13928 327 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 IDSP22304 550 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 PSMB5P28074 263 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 ETV6P41212 452 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 CRATP43155 626 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 COPZ1P61923 177 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 SPIBQ01892 262 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 DOC2AQ14183 400 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 MED22Q15528 200 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 TEAD4Q15561 434 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 SPANXN2Q5MJ10 180 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 Q6ZSR6 202 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 CCDC190Q86UF4 302 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 FAM20CQ8IXL6 584 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 C1orf52Q8N6N3 182 aaKnown RBP8.15□□□□□ -1.1
TRIM55-204ENST00000353317 LINC01555Q8NAE3 123 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 FBXO15Q8NCQ5 510 aaPredicted RBP8.15□□□□□ -1.1
TRIM55-204ENST00000353317 ZNF740Q8NDX6 193 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 OR9A1PQ8NGU1 263 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 NECAB3Q96P71 396 aaPredicted RBP8.15□□□□□ -1.1
TRIM55-204ENST00000353317 ROGDIQ9GZN7 287 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 NUAK2Q9H093 628 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 XKR8Q9H6D3 395 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 TBC1D17Q9HA65 648 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 POLMQ9NP87 494 aaPredicted RBP8.15□□□□□ -1.1
TRIM55-204ENST00000353317 ERVK13-1Q9NX77 482 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 SNX8Q9Y5X2 465 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 THADAQ6YHU6 1953 aa8.15□□□□□ -1.1
TRIM55-204ENST00000353317 ARID1BQ8NFD5 2236 aaPredicted RBP8.15□□□□□ -1.11
TRIM55-204ENST00000353317 LRRC72A6NJI9 287 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 A6NL46 340 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 PCDH17O14917 1159 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 UGDHO60701 494 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 CCNKO75909 580 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 SNX4O95219 450 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 ANXA4P09525 319 aaPredicted RBP8.15□□□□□ -1.11
TRIM55-204ENST00000353317 PIK3CBP42338 1070 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 OLR1P78380 273 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 DMPKQ09013 629 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 FOXD4Q12950 439 aaPredicted RBP8.15□□□□□ -1.11
TRIM55-204ENST00000353317 TSTA3Q13630 321 aaPredicted RBP8.15□□□□□ -1.11
TRIM55-204ENST00000353317 NFATC4Q14934 902 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 PTGES3Q15185 160 aaKnown RBP8.15□□□□□ -1.11
TRIM55-204ENST00000353317 ALG11Q2TAA5 492 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 AGAP6Q5VW22 663 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 C19orf48Q6RUI8 117 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 ATCAYQ86WG3 371 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 NRROSQ86YC3 692 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 VPS37AQ8NEZ2 397 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 GPR156Q8NFN8 814 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 TSTD1Q8NFU3 115 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 OR4K1Q8NGD4 311 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 OR5K2Q8NHB8 316 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 CHAC2Q8WUX2 184 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 AGAP4Q96P64 663 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 KCNS3Q9BQ31 491 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 ACAT2Q9BWD1 397 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 SGK2Q9HBY8 427 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 MOV10Q9HCE1 1003 aaKnown RBP8.15□□□□□ -1.11
TRIM55-204ENST00000353317 IMPAD1Q9NX62 359 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 SH3BP4Q9P0V3 963 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 CORO2BQ9UQ03 480 aa8.15□□□□□ -1.11
TRIM55-204ENST00000353317 EXO1Q9UQ84 846 aaKnown RBP8.15□□□□□ -1.11
TRIM55-204ENST00000353317 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.15□□□□□ -1.11
TRIM55-204ENST00000353317 TTC28Q96AY4 2481 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 TP53BP1Q12888 1972 aaPredicted RBP8.14□□□□□ -1.11
TRIM55-204ENST00000353317 ASXL3Q9C0F0 2248 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 A0A1W2PPV9 198 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 CACNB4O00305 520 aaPredicted RBP8.14□□□□□ -1.11
TRIM55-204ENST00000353317 ARHGAP33O14559 1287 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 ZW10O43264 779 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 WNT1P04628 370 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 SOX6P35712 828 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 HBA1P69905 142 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 TSTQ16762 297 aaKnown RBP8.14□□□□□ -1.11
TRIM55-204ENST00000353317 ZNF385BQ569K4 471 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 RSBN1Q5VWQ0 802 aaPredicted RBP8.14□□□□□ -1.11
TRIM55-204ENST00000353317 KIAA0895LQ68EN5 471 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 SLCO4C1Q6ZQN7 724 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 CAMKMTQ7Z624 323 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 KLHDC8AQ8IYD2 350 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 DEPDC4Q8N2C3 294 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 OR4A15Q8NGL6 344 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 PATE1Q8WXA2 126 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 GTPBP3Q969Y2 492 aaKnown RBP8.14□□□□□ -1.11
TRIM55-204ENST00000353317 TP53INP1Q96A56 240 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 COQ8BQ96D53 544 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 C12orf66Q96MD2 445 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 FOPNLQ96NB1 174 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 MGLLQ99685 303 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 SGPP1Q9BX95 441 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 MARCH7Q9H992 704 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 NOX1Q9Y5S8 564 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 DNMT3AQ9Y6K1 912 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms