RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 DNAJC11Q9NVH1 559 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 PLXNA1Q9UIW2 1896 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 ZFP37Q9Y6Q3 630 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-201ENST00000352993 GLYATL1P3A0A0U1RQE8 302 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 PRAMEF25A6NGN4 478 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 HEPACAM2A8MVW5 462 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 SEC14L5O43304 696 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 HOXB9P17482 250 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-201ENST00000352993 C4BPBP20851 252 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 VIPR1P32241 457 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 CBX5P45973 191 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 PXNP49023 591 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-201ENST00000352993 ZNF273Q14593 569 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 MBTPS1Q14703 1052 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 OPCMLQ14982 345 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 DUSP6Q16828 381 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 ZNF791Q3KP31 576 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-201ENST00000352993 MPPE1Q53F39 396 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 XKR4Q5GH76 650 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 RPS26P11Q5JNZ5 115 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-201ENST00000352993 ATXN7L2Q5T6C5 722 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-201ENST00000352993 TNFAIP8L2Q6P589 184 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-201ENST00000352993 METAP1DQ6UB28 335 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-201ENST00000352993 LYPD4Q6UWN0 246 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 C3P1Q6ZMU1 363 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 LAS2Q8IYD9 372 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 HS6ST3Q8IZP7 471 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 ANKRD53Q8N9V6 530 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 UXS1Q8NBZ7 420 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 MOSPD2Q8NHP6 518 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 CHTF18Q8WVB6 975 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 ELMOD3Q96FG2 381 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 OR4K3Q96R72 315 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 PARK7Q99497 189 aaKnown RBP7.25□□□□□ -1.25
BRCA1-201ENST00000352993 PKMYT1Q99640 499 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 MGME1Q9BQP7 344 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 SLC6A15Q9H2J7 730 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 TRPM5Q9NZQ8 1165 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 MRPL15Q9P015 296 aaKnown RBP7.25□□□□□ -1.25
BRCA1-201ENST00000352993 GMEB2Q9UKD1 530 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 ACSL5Q9ULC5 683 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 PIKFYVEQ9Y2I7 2098 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 ANKRD36A6QL64 1941 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 A0A1B0GVM2 712 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 SMIM35A0A1B0GVV1 85 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 TCRBV16S1A1N1A0A5B0 115 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 QSOX1O00391 747 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 SCAMP2O15127 329 aaKnown RBP7.25□□□□□ -1.25
BRCA1-201ENST00000352993 MID1O15344 667 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 MMP20O60882 483 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 KCNJ13O60928 360 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 SCN2BO60939 215 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 GATBO75879 557 aaKnown RBP7.25□□□□□ -1.25
BRCA1-201ENST00000352993 CH25HO95992 272 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 TCRBP04435 133 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 H2AFB2P0C5Z0 115 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 XCR1P46094 333 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 RHOAP61586 193 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 B2MP61769 119 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 RPS26P62854 115 aaKnown RBP7.25□□□□□ -1.25
BRCA1-201ENST00000352993 HBA1P69905 142 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 MTAPQ13126 283 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 EIF4EBP2Q13542 120 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-201ENST00000352993 IGSF11Q5DX21 431 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 CDKL4Q5MAI5 379 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 CLEC12AQ5QGZ9 265 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 KIAA1161Q6NSJ0 714 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 CEACAM20Q6UY09 585 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 DDX53Q86TM3 631 aaKnown RBP7.25□□□□□ -1.25
BRCA1-201ENST00000352993 GPR135Q8IZ08 494 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 HUS1BQ8NHY5 278 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 GIMAP1Q8WWP7 306 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 CXorf58Q96LI9 332 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 SFXN2Q96NB2 322 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 SGK2Q9HBY8 427 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 FANCFQ9NPI8 374 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 CD93Q9NPY3 652 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 CUEDC1Q9NWM3 386 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-201ENST00000352993 HPF1Q9NWY4 346 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 COPS3Q9UNS2 423 aa7.25□□□□□ -1.25
BRCA1-201ENST00000352993 DNAJC25-GNG10A0A024R161 153 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-201ENST00000352993 ANKDD1BA6NHY2 528 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 SGK494L7N484 410 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 DPM1O60762 260 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 SLC19A2O60779 497 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 B3GALNT1O75752 331 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 CNMDO75829 334 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 ADAP00813 363 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 HLA-DPB1P04440 258 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 ZP3P21754 424 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 SLC6A1P30531 599 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 ACSL1P33121 698 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 BLVRAP53004 296 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 ZNF280AP59817 542 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-201ENST00000352993 WDR5P61964 334 aaKnown RBP7.24□□□□□ -1.25
BRCA1-201ENST00000352993 SNRPGP62308 76 aaKnown RBP7.24□□□□□ -1.25
BRCA1-201ENST00000352993 ZNF177Q13360 481 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-201ENST00000352993 GNA13Q14344 377 aa7.24□□□□□ -1.25
BRCA1-201ENST00000352993 CRB2Q5IJ48 1285 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms