RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 TDRKHQ9Y2W6 561 aaKnown RBP7.76□□□□□ -1.17
CD44-205ENST00000352818 PRKAB1Q9Y478 270 aa7.76□□□□□ -1.17
CD44-205ENST00000352818 TRBC2A0A5B9 178 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 PRSS38A1L453 326 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 UPK1AO00322 258 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 DLGAP1O14490 977 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 TPST1O60507 370 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 DPM1O60762 260 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 CLEC3AO75596 197 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 B3GALT4O96024 378 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 FUCA1P04066 466 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 SEMG1P04279 462 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 LINGO3P0C6S8 592 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 MYF6P23409 242 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 NDUFS1P28331 727 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 RABIFP47224 123 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 YPEL5P62699 121 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 TRA2BP62995 288 aaKnown RBP7.75□□□□□ -1.17
CD44-205ENST00000352818 ABATP80404 500 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 PLIN5Q00G26 463 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 MC1RQ01726 317 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 LTBQ06643 244 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 PRDX1Q06830 199 aaKnown RBP7.75□□□□□ -1.17
CD44-205ENST00000352818 EPS8Q12929 822 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 FADDQ13158 208 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 TSTA3Q13630 321 aaPredicted RBP7.75□□□□□ -1.17
CD44-205ENST00000352818 APOFQ13790 326 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 ELOAQ14241 798 aaKnown RBP7.75□□□□□ -1.17
CD44-205ENST00000352818 NRF1Q16656 503 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 VMACQ2NL98 169 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 SLC36A3Q495N2 470 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 DEPDC1Q5TB30 811 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 KHDRBS2Q5VWX1 349 aaKnown RBP7.75□□□□□ -1.17
CD44-205ENST00000352818 CHST15Q7LFX5 561 aaPredicted RBP7.75□□□□□ -1.17
CD44-205ENST00000352818 PAGE2Q7Z2X7 111 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 ZNF551Q7Z340 670 aaPredicted RBP7.75□□□□□ -1.17
CD44-205ENST00000352818 ANKRD46Q86W74 232 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 ZZZ3Q8IYH5 903 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 NLGN4XQ8N0W4 816 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 ZCCHC7Q8N3Z6 543 aaKnown RBP7.75□□□□□ -1.17
CD44-205ENST00000352818 BMPERQ8N8U9 685 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 LINC01555Q8NAE3 123 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 GPR156Q8NFN8 814 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 NLGN4YQ8NFZ3 816 aaPredicted RBP7.75□□□□□ -1.17
CD44-205ENST00000352818 ZFP28Q8NHY6 868 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 ZFP90Q8TF47 636 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 GFM2Q969S9 779 aaKnown RBP7.75□□□□□ -1.17
CD44-205ENST00000352818 SH3KBP1Q96B97 665 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 PPCDCQ96CD2 204 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 AURKBQ96GD4 344 aaPredicted RBP7.75□□□□□ -1.17
CD44-205ENST00000352818 CNBD2Q96M20 576 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 WDR92Q96MX6 357 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 OR2M4Q96R27 311 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 CENPKQ9BS16 269 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 ADI1Q9BV57 179 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 OSBPL10Q9BXB5 764 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 ZNF717Q9BY31 904 aaPredicted RBP7.75□□□□□ -1.17
CD44-205ENST00000352818 MRPS26Q9BYN8 205 aaKnown RBP7.75□□□□□ -1.17
CD44-205ENST00000352818 OR51B5Q9H339 312 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 CXorf56Q9H5V9 222 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 PIF1Q9H611 641 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 CARS2Q9HA77 564 aaKnown RBP7.75□□□□□ -1.17
CD44-205ENST00000352818 TPT1P8Q9HAU6 139 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 NTN4Q9HB63 628 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 PNPLA3Q9NST1 481 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 SMPD3Q9NY59 655 aaPredicted RBP7.75□□□□□ -1.17
CD44-205ENST00000352818 USE1Q9NZ43 259 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 NDUFA13Q9P0J0 144 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 DNAJB9Q9UBS3 223 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 PLAGL1Q9UM63 463 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 WDR37Q9Y2I8 494 aa7.75□□□□□ -1.17
CD44-205ENST00000352818 MXRA5Q9NR99 2828 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 RNF103-CHMP3A0A140T963 221 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 ANKDD1BA6NHY2 528 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 H0YAE9 185 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 EI24O14681 340 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 KLHL18O94889 574 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 TBX6O95947 436 aaPredicted RBP7.74□□□□□ -1.17
CD44-205ENST00000352818 SERPINA1P01009 418 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 TGFB1P01137 390 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 GSNP06396 782 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 TPP2P29144 1249 aaPredicted RBP7.74□□□□□ -1.17
CD44-205ENST00000352818 CAPGP40121 348 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 STAT5AP42229 794 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 FRKP42685 505 aaPredicted RBP7.74□□□□□ -1.17
CD44-205ENST00000352818 ALDH3A2P51648 485 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 PGDP52209 483 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 ART1P52961 327 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 CSNK1G2P78368 415 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 MYBPC1Q00872 1141 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 MEF2AQ02078 507 aaPredicted RBP7.74□□□□□ -1.17
CD44-205ENST00000352818 RBBP4Q09028 425 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 MERTKQ12866 999 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 GAB1Q13480 694 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 DAG1Q14118 895 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 ERV3-1Q14264 604 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 ADRM1Q16186 407 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 RPE65Q16518 533 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 NKG7Q16617 165 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 ADPRMQ3LIE5 342 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms