RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 PITHD1Q9GZP4 211 aaPredicted RBP12.68□□□□□ -0.38
UBA3-201ENST00000349511 HMG20AQ9NP66 347 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 TEX10Q9NXF1 929 aaPredicted RBP12.68□□□□□ -0.38
UBA3-201ENST00000349511 SCN3BQ9NY72 215 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 KLHL3Q9UH77 587 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 DAPK2Q9UIK4 370 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 HSPE1-MOB4S4R3N1 261 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 UNC13CQ8NB66 2214 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 OR2A25A4D2G3 310 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 CLIC1O00299 241 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 KPNA4O00629 521 aaPredicted RBP12.68□□□□□ -0.38
UBA3-201ENST00000349511 SLC22A1O15245 554 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 CAPN5O15484 640 aaPredicted RBP12.68□□□□□ -0.38
UBA3-201ENST00000349511 SCN2BO60939 215 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 KCNK5O95279 499 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 SEMG1P04279 462 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 FABP3P05413 133 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 ST6GAL1P15907 406 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 ENGP17813 658 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 HOXA6P31267 233 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 DNAJA1P31689 397 aaKnown RBP12.68□□□□□ -0.38
UBA3-201ENST00000349511 HPCAL1P37235 193 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 MASP1P48740 699 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 HNRNPFP52597 415 aaKnown RBP12.68□□□□□ -0.38
UBA3-201ENST00000349511 CXCR4P61073 352 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 SRSF11Q05519 484 aaKnown RBP12.68□□□□□ -0.38
UBA3-201ENST00000349511 TEAD4Q15561 434 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 DUOXA1Q1HG43 343 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 VMACQ2NL98 169 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 TRIM16LQ309B1 348 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.68□□□□□ -0.38
UBA3-201ENST00000349511 ARMC6Q6NXE6 501 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 CCDC81Q6ZN84 652 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 FAM92BQ6ZTR7 304 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 MSANTD1Q6ZTZ1 278 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 TBC1D19Q8N5T2 526 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 TTC29Q8NA56 475 aaPredicted RBP12.68□□□□□ -0.38
UBA3-201ENST00000349511 TTLQ8NG68 377 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 OR8J2Q8NGG1 315 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 ZCCHC10Q8TBK6 192 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 ZFP90Q8TF47 636 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 TM4SF18Q96CE8 201 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 RHNO1Q9BSD3 238 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 WDR12Q9GZL7 423 aaKnown RBP12.68□□□□□ -0.38
UBA3-201ENST00000349511 REEP4Q9H6H4 257 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 STARD5Q9NSY2 213 aa12.68□□□□□ -0.38
UBA3-201ENST00000349511 PDP1Q9P0J1 537 aaPredicted RBP12.68□□□□□ -0.38
UBA3-201ENST00000349511 RP1P56715 2156 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 GLOD5A6NK44 160 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 M0R3G1 203 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 P2RX6O15547 441 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 MT-ND2P03891 347 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 CTSBP07858 339 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 FURINP09958 794 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 GNSP15586 552 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 FPR1P21462 350 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 KDELR2P33947 212 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 AHRP35869 848 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 FASLGP48023 281 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 TRPC1P48995 793 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 CASP9P55211 416 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 VBP1P61758 197 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 VLDLRP98155 873 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 OXA1LQ15070 435 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 SMN1Q16637 294 aaKnown RBP12.67□□□□□ -0.38
UBA3-201ENST00000349511 MPEG1Q2M385 716 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 SYT6Q5T7P8 510 aaPredicted RBP12.67□□□□□ -0.38
UBA3-201ENST00000349511 FAM71E1Q6IPT2 247 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 PAGE2Q7Z2X7 111 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 VTCN1Q7Z7D3 282 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 NUDT13Q86X67 352 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 OR2A5Q96R48 311 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 ELF4Q99607 663 aaPredicted RBP12.67□□□□□ -0.38
UBA3-201ENST00000349511 APOL4Q9BPW4 351 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 ALOXE3Q9BYJ1 711 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 FAM60AQ9NP50 221 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 MIEF1Q9NQG6 463 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 NECTIN3Q9NQS3 549 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 SIRT5Q9NXA8 310 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 RPS6KA6Q9UK32 745 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 FBXW2Q9UKT8 454 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 A0A0J9YY10 115 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 PATE3B3GLJ2 98 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 PRMT3O60678 531 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 SEMA3DO95025 777 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 NADKO95544 446 aaPredicted RBP12.67□□□□□ -0.38
UBA3-201ENST00000349511 FADS2O95864 444 aaKnown RBP12.67□□□□□ -0.38
UBA3-201ENST00000349511 CFIP05156 583 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 CERS1P27544 350 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 PSMB9P28065 219 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 CTSKP43235 329 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 RPS15AP62244 130 aaKnown RBP12.67□□□□□ -0.38
UBA3-201ENST00000349511 MAD2L1BPQ15013 274 aaPredicted RBP12.67□□□□□ -0.38
UBA3-201ENST00000349511 SHBQ15464 509 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 DGUOKQ16854 277 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 PERM1Q5SV97 790 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 ABHD17CQ6PCB6 329 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 ASPGQ86U10 573 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 P2RY8Q86VZ1 359 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 PTOV1Q86YD1 416 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms