RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 PPP2R1BP30154 601 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 SLC5A2P31639 672 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 BUD31P41223 144 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 MC3RP41968 323 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 PXNP49023 591 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 HMGA2P52926 109 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ARF3P61204 181 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 PPP1CAP62136 330 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 RPP38P78345 283 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 TNFRSF17Q02223 184 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 TOP3AQ13472 1001 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 RAB39AQ14964 217 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ZNF438Q7Z4V0 828 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 TSPYL5Q86VY4 417 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 BPIFB6Q8NFQ5 453 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 OR56A1Q8NGH5 318 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ZDHHC1Q8WTX9 485 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 RERGQ96A58 199 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 MOAP1Q96BY2 351 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 C10orf90Q96M02 699 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 SERINC2Q96SA4 455 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 APOL4Q9BPW4 351 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 LRRC61Q9BV99 259 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 GABARAPL3Q9BY60 117 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 RHCGQ9UBD6 479 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 SEC14L3Q9UDX4 400 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 HSPE1-MOB4S4R3N1 261 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 A0A0J9YY10 115 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 B4DGG1 531 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 PCDH17O14917 1159 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ABCB7O75027 752 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 DNAJB6O75190 326 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 SERPINB7O75635 380 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 GADD45GO95257 159 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ANGPTL1O95841 491 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ANXA8P13928 327 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 MAGEA8P43361 318 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 LIMS1P48059 325 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 KCNJ5P48544 419 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 LIM2P55344 173 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 GABARAPL2P60520 117 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 PRR5P85299 388 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 RELAQ04206 551 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 FOXD4Q12950 439 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 RUNX2Q13950 521 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ABHD13Q7L211 337 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 OLIG3Q7RTU3 272 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 CLVS1Q8IUQ0 354 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 PHF10Q8WUB8 498 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 RASSF5Q8WWW0 418 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ELP4Q96EB1 424 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 C16orf58Q96GQ5 468 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ANKRA2Q9H9E1 313 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 CXorf21Q9HAI6 301 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 AASSQ9UDR5 926 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 PHF11Q9UIL8 331 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 DAPP1Q9UN19 280 aa13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 GPC6Q9Y625 555 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP1-202ENST00000346416 OR5K3A6NET4 321 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 PTGES3LE9PB15 166 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 FFAR1O14842 300 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 EMC8O43402 210 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 B3GALT2O43825 422 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 XPNPEP2O43895 674 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 CPNE6O95741 557 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 HTR1AP08908 422 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 CCDC159P0C7I6 412 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 TYRP1P17643 537 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ANXA11P50995 505 aaKnown RBP13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 CRISP3P54108 245 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 LTB4RQ15722 352 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 GPR153Q6NV75 609 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 CCDC71Q8IV32 467 aaPredicted RBP13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 SPARTQ8N0X7 666 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 OR9Q2Q8NGE9 314 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 RSC1A1Q92681 617 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 KAT2AQ92830 837 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 MPP4Q96JB8 637 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ZNF354BQ96LW1 612 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 CSF3RQ99062 836 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 PITX2Q99697 317 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 NIPSNAP1Q9BPW8 284 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 FOXQ1Q9C009 403 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 FANCEQ9HB96 536 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 C3orf14Q9HBI5 128 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 PAK1IP1Q9NWT1 392 aaPredicted RBP13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 KCND3Q9UK17 655 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 MRPS2Q9Y399 296 aaKnown RBP13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 SCN2AQ99250 2005 aa13.29□□□□□ -0.28
CDK5RAP1-202ENST00000346416 KRBA1A5PL33 1030 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 FAM170BA6NMN3 283 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 E9PQ18 207 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ZSCAN9O15535 394 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 SEMA7AO75326 666 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ALOX12P18054 663 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ZNF10P21506 573 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 PCSK6P29122 969 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 TTKP33981 857 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 OLR1P78380 273 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 SIM1P81133 766 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms