RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 FBXO45P0C2W1 286 aa16.41■□□□□ 0.22
CKLF-202ENST00000345436 CCL3P10147 92 aa16.41■□□□□ 0.22
CKLF-202ENST00000345436 HSD3B1P14060 373 aa16.41■□□□□ 0.22
CKLF-202ENST00000345436 NT5EP21589 574 aa16.41■□□□□ 0.22
CKLF-202ENST00000345436 HSD3B2P26439 372 aa16.41■□□□□ 0.22
CKLF-202ENST00000345436 DNASE1L1P49184 302 aa16.41■□□□□ 0.22
CKLF-202ENST00000345436 TRA2BP62995 288 aaKnown RBP16.41■□□□□ 0.22
CKLF-202ENST00000345436 TRAF3Q13114 568 aa16.41■□□□□ 0.22
CKLF-202ENST00000345436 RASA2Q15283 850 aa16.41■□□□□ 0.22
CKLF-202ENST00000345436 TMEM198Q66K66 360 aa16.41■□□□□ 0.22
CKLF-202ENST00000345436 ADGRD1Q6QNK2 874 aa16.41■□□□□ 0.22
CKLF-202ENST00000345436 TRILQ7L0X0 811 aa16.41■□□□□ 0.22
CKLF-202ENST00000345436 FBXW8Q8N3Y1 598 aa16.41■□□□□ 0.22
CKLF-202ENST00000345436 ACMSDQ8TDX5 336 aa16.41■□□□□ 0.22
CKLF-202ENST00000345436 ZNF483Q8TF39 744 aaPredicted RBP16.41■□□□□ 0.22
CKLF-202ENST00000345436 CHTF18Q8WVB6 975 aa16.41■□□□□ 0.22
CKLF-202ENST00000345436 TRIM44Q96DX7 344 aaPredicted RBP16.41■□□□□ 0.22
CKLF-202ENST00000345436 MRPL1Q9BYD6 325 aaKnown RBP16.41■□□□□ 0.22
CKLF-202ENST00000345436 ZBTB26Q9HCK0 441 aa16.41■□□□□ 0.22
CKLF-202ENST00000345436 KCNJ16Q9NPI9 418 aa16.41■□□□□ 0.22
CKLF-202ENST00000345436 VPS29Q9UBQ0 182 aa16.41■□□□□ 0.22
CKLF-202ENST00000345436 TRPS1Q9UHF7 1281 aa16.41■□□□□ 0.22
CKLF-202ENST00000345436 ZNF780BQ9Y6R6 833 aa16.41■□□□□ 0.22
CKLF-202ENST00000345436 TRGV5A0A0B4J1U4 118 aa16.4■□□□□ 0.22
CKLF-202ENST00000345436 PINLYPA6NC86 204 aa16.4■□□□□ 0.22
CKLF-202ENST00000345436 A8MT66 165 aa16.4■□□□□ 0.22
CKLF-202ENST00000345436 FOXO6A8MYZ6 492 aa16.4■□□□□ 0.22
CKLF-202ENST00000345436 ZNHIT1O43257 154 aa16.4■□□□□ 0.22
CKLF-202ENST00000345436 WDR1O75083 606 aa16.4■□□□□ 0.22
CKLF-202ENST00000345436 SUPT7LO94864 414 aa16.4■□□□□ 0.22
CKLF-202ENST00000345436 SNX4O95219 450 aa16.4■□□□□ 0.22
CKLF-202ENST00000345436 GSTA1P08263 222 aa16.4■□□□□ 0.22
CKLF-202ENST00000345436 GABRA1P14867 456 aa16.4■□□□□ 0.22
CKLF-202ENST00000345436 CSNK2A2P19784 350 aaPredicted RBP16.4■□□□□ 0.22
CKLF-202ENST00000345436 ACVR2AP27037 513 aa16.4■□□□□ 0.22
CKLF-202ENST00000345436 ECHS1P30084 290 aa16.4■□□□□ 0.22
CKLF-202ENST00000345436 MAGEA5P43359 124 aa16.4■□□□□ 0.22
CKLF-202ENST00000345436 CLCQ05315 142 aa16.4■□□□□ 0.22
CKLF-202ENST00000345436 PMPCAQ10713 525 aa16.4■□□□□ 0.22
CKLF-202ENST00000345436 EBPQ15125 230 aaKnown RBP16.4■□□□□ 0.22
CKLF-202ENST00000345436 ZNF585AQ6P3V2 769 aa16.4■□□□□ 0.22
CKLF-202ENST00000345436 DGAT2L6Q6ZPD8 337 aa16.4■□□□□ 0.22
CKLF-202ENST00000345436 SAMD14Q8IZD0 417 aaPredicted RBP16.4■□□□□ 0.22
CKLF-202ENST00000345436 LIX1Q8N485 282 aa16.4■□□□□ 0.22
CKLF-202ENST00000345436 C17orf47Q8NEP4 570 aa16.4■□□□□ 0.22
CKLF-202ENST00000345436 LILRB4Q8NHJ6 448 aa16.4■□□□□ 0.22
CKLF-202ENST00000345436 NSUN5Q96P11 429 aaKnown RBP16.4■□□□□ 0.22
CKLF-202ENST00000345436 SECISBP2Q96T21 854 aaKnown RBP16.4■□□□□ 0.22
CKLF-202ENST00000345436 DOHHQ9BU89 302 aa16.4■□□□□ 0.22
CKLF-202ENST00000345436 TUBA8Q9NY65 449 aaPredicted RBP16.4■□□□□ 0.22
CKLF-202ENST00000345436 FETUBQ9UGM5 382 aa16.4■□□□□ 0.22
CKLF-202ENST00000345436 GTF3C1Q12789 2109 aa16.4■□□□□ 0.22
CKLF-202ENST00000345436 MYO9AB2RTY4 2548 aa16.4■□□□□ 0.22
CKLF-202ENST00000345436 ANKRD33BA6NCL7 494 aa16.39■□□□□ 0.21
CKLF-202ENST00000345436 HRKO00198 91 aa16.39■□□□□ 0.21
CKLF-202ENST00000345436 ULK1O75385 1050 aa16.39■□□□□ 0.21
CKLF-202ENST00000345436 PDYNP01213 254 aa16.39■□□□□ 0.21
CKLF-202ENST00000345436 PRF1P14222 555 aa16.39■□□□□ 0.21
CKLF-202ENST00000345436 CPMP14384 443 aa16.39■□□□□ 0.21
CKLF-202ENST00000345436 ATP5F1P24539 256 aaPredicted RBP16.39■□□□□ 0.21
CKLF-202ENST00000345436 HSD17B3P37058 310 aa16.39■□□□□ 0.21
CKLF-202ENST00000345436 PIGAP37287 484 aa16.39■□□□□ 0.21
CKLF-202ENST00000345436 NR0B1P51843 470 aaKnown RBP16.39■□□□□ 0.21
CKLF-202ENST00000345436 CDH13P55290 713 aa16.39■□□□□ 0.21
CKLF-202ENST00000345436 NAA20P61599 178 aa16.39■□□□□ 0.21
CKLF-202ENST00000345436 FUT7Q11130 342 aa16.39■□□□□ 0.21
CKLF-202ENST00000345436 FOXO1Q12778 655 aa16.39■□□□□ 0.21
CKLF-202ENST00000345436 SF3B4Q15427 424 aaKnown RBP eCLIP16.39■□□□□ 0.21
CKLF-202ENST00000345436 NTRK2Q16620 822 aa16.39■□□□□ 0.21
CKLF-202ENST00000345436 B3GNT6Q6ZMB0 384 aa16.39■□□□□ 0.21
CKLF-202ENST00000345436 COMMD6Q7Z4G1 85 aa16.39■□□□□ 0.21
CKLF-202ENST00000345436 PACS2Q86VP3 889 aa16.39■□□□□ 0.21
CKLF-202ENST00000345436 GBP7Q8N8V2 638 aaPredicted RBP16.39■□□□□ 0.21
CKLF-202ENST00000345436 OR10Q1Q8NGQ4 319 aa16.39■□□□□ 0.21
CKLF-202ENST00000345436 DIO2Q92813 273 aa16.39■□□□□ 0.21
CKLF-202ENST00000345436 CCDC126Q96EE4 140 aa16.39■□□□□ 0.21
CKLF-202ENST00000345436 JSRP1Q96MG2 331 aaPredicted RBP16.39■□□□□ 0.21
CKLF-202ENST00000345436 OR10A5Q9H207 317 aa16.39■□□□□ 0.21
CKLF-202ENST00000345436 SH2D2AQ9NP31 389 aa16.39■□□□□ 0.21
CKLF-202ENST00000345436 DCDC2Q9UHG0 476 aa16.39■□□□□ 0.21
CKLF-202ENST00000345436 PCDHA9Q9Y5H5 950 aa16.39■□□□□ 0.21
CKLF-202ENST00000345436 NPFFR2Q9Y5X5 522 aa16.39■□□□□ 0.21
CKLF-202ENST00000345436 A0A0G2JMM0 328 aa16.38■□□□□ 0.21
CKLF-202ENST00000345436 A0A1W2PPB8 328 aa16.38■□□□□ 0.21
CKLF-202ENST00000345436 A0A1W2PRS3 328 aa16.38■□□□□ 0.21
CKLF-202ENST00000345436 WASHC1A8K0Z3 465 aa16.38■□□□□ 0.21
CKLF-202ENST00000345436 KIR3DP1A8MWS1 328 aa16.38■□□□□ 0.21
CKLF-202ENST00000345436 RIPK2O43353 540 aa16.38■□□□□ 0.21
CKLF-202ENST00000345436 ZNF354AO60765 605 aaPredicted RBP16.38■□□□□ 0.21
CKLF-202ENST00000345436 ERAL1O75616 437 aaKnown RBP16.38■□□□□ 0.21
CKLF-202ENST00000345436 NADKO95544 446 aaPredicted RBP16.38■□□□□ 0.21
CKLF-202ENST00000345436 ESRRBO95718 433 aa16.38■□□□□ 0.21
CKLF-202ENST00000345436 CAPN3P20807 821 aa16.38■□□□□ 0.21
CKLF-202ENST00000345436 IMPDH1P20839 514 aa16.38■□□□□ 0.21
CKLF-202ENST00000345436 HMOX2P30519 316 aa16.38■□□□□ 0.21
CKLF-202ENST00000345436 CSTF3Q12996 717 aaKnown RBP16.38■□□□□ 0.21
CKLF-202ENST00000345436 RPS6KA2Q15349 733 aa16.38■□□□□ 0.21
CKLF-202ENST00000345436 UBAP2Q5T6F2 1119 aaKnown RBP16.38■□□□□ 0.21
CKLF-202ENST00000345436 SLC48A1Q6P1K1 146 aa16.38■□□□□ 0.21
CKLF-202ENST00000345436 GPRIN3Q6ZVF9 776 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms