RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 C8orf89P0DMQ9 161 aa20.23■□□□□ 0.83
CCDC38-201ENST00000344280 NR2F1P10589 423 aa20.23■□□□□ 0.83
CCDC38-201ENST00000344280 PPP5CP53041 499 aa20.23■□□□□ 0.83
CCDC38-201ENST00000344280 FUT5Q11128 374 aa20.23■□□□□ 0.83
CCDC38-201ENST00000344280 TARDBPQ13148 414 aaKnown RBP eCLIP20.23■□□□□ 0.83
CCDC38-201ENST00000344280 TCEA2Q15560 299 aa20.23■□□□□ 0.83
CCDC38-201ENST00000344280 TBC1D19Q8N5T2 526 aa20.23■□□□□ 0.83
CCDC38-201ENST00000344280 IQCF1Q8N6M8 205 aa20.23■□□□□ 0.83
CCDC38-201ENST00000344280 OR52E1Q8NGJ3 308 aa20.23■□□□□ 0.83
CCDC38-201ENST00000344280 CRELD1Q96HD1 420 aa20.23■□□□□ 0.83
CCDC38-201ENST00000344280 PITHD1Q9GZP4 211 aaPredicted RBP20.23■□□□□ 0.83
CCDC38-201ENST00000344280 SLC6A17Q9H1V8 727 aa20.23■□□□□ 0.83
CCDC38-201ENST00000344280 SLC25A19Q9HC21 320 aa20.23■□□□□ 0.83
CCDC38-201ENST00000344280 FZD3Q9NPG1 666 aa20.23■□□□□ 0.83
CCDC38-201ENST00000344280 CTPS2Q9NRF8 586 aa20.23■□□□□ 0.83
CCDC38-201ENST00000344280 CNOT2Q9NZN8 540 aaKnown RBP20.23■□□□□ 0.83
CCDC38-201ENST00000344280 CLEC2DQ9UHP7 191 aa20.23■□□□□ 0.83
CCDC38-201ENST00000344280 ATG4BQ9Y4P1 393 aa20.23■□□□□ 0.83
CCDC38-201ENST00000344280 DOCK8Q8NF50 2099 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 A0A1W2PR48 441 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 ERI3O43414 337 aaKnown RBP20.22■□□□□ 0.83
CCDC38-201ENST00000344280 ADAM23O75077 832 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 NME6O75414 186 aaPredicted RBP20.22■□□□□ 0.83
CCDC38-201ENST00000344280 TP53P04637 393 aaPredicted RBP20.22■□□□□ 0.83
CCDC38-201ENST00000344280 CEACAM5P06731 702 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 DMPKQ09013 629 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 SSX1Q16384 188 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 PLEKHG7Q6ZR37 379 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 ZNF367Q7RTV3 350 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 ATCAYQ86WG3 371 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 ZNF764Q96H86 408 aaPredicted RBP20.22■□□□□ 0.83
CCDC38-201ENST00000344280 SLC6A18Q96N87 628 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 QRSL1Q9H0R6 528 aaKnown RBP20.22■□□□□ 0.83
CCDC38-201ENST00000344280 SFXN1Q9H9B4 322 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 ANKRA2Q9H9E1 313 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 SPHK1Q9NYA1 384 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 ATG2AQ2TAZ0 1938 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 MDC1Q14676 2089 aaKnown RBP20.22■□□□□ 0.83
CCDC38-201ENST00000344280 USP34Q70CQ2 3546 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 FAAHO00519 579 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 MPZL2O60487 215 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 SERPINB7O75635 380 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 DNTTP04053 509 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 CHRM4P08173 479 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 CKMT1AP12532 417 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 PKLRP30613 574 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 XKP51811 444 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 SEC13P55735 322 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 SLAMF1Q13291 335 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 MLC1Q15049 377 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 SLC22A16Q86VW1 577 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 CCDC116Q8IYX3 515 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 CYP4Z2PQ8N1L4 340 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 SUN3Q8TAQ9 357 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 MS4A6EQ96DS6 147 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 KXD1Q9BQD3 176 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 BTBD1Q9H0C5 482 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 POLR2J3Q9H1A7 115 aaKnown RBP20.22■□□□□ 0.83
CCDC38-201ENST00000344280 TRPV4Q9HBA0 871 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 MRPS30Q9NP92 439 aaKnown RBP20.22■□□□□ 0.83
CCDC38-201ENST00000344280 WBP1LQ9NX94 342 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 GDE1Q9NZC3 331 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 SCHIP1Q9P0W5 487 aaPredicted RBP20.22■□□□□ 0.83
CCDC38-201ENST00000344280 MGAT4BQ9UQ53 548 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 KCNE3Q9Y6H6 103 aa20.22■□□□□ 0.83
CCDC38-201ENST00000344280 MYO9BQ13459 2157 aa20.21■□□□□ 0.83
CCDC38-201ENST00000344280 AGAP5A6NIR3 686 aa20.21■□□□□ 0.83
CCDC38-201ENST00000344280 ARHGAP33O14559 1287 aa20.21■□□□□ 0.83
CCDC38-201ENST00000344280 TNNI3P19429 210 aa20.21■□□□□ 0.83
CCDC38-201ENST00000344280 PEBP1P30086 187 aaKnown RBP20.21■□□□□ 0.83
CCDC38-201ENST00000344280 LASP1Q14847 261 aaKnown RBP20.21■□□□□ 0.83
CCDC38-201ENST00000344280 SLX4IPQ5VYV7 408 aa20.21■□□□□ 0.83
CCDC38-201ENST00000344280 C18orf63Q68DL7 685 aa20.21■□□□□ 0.83
CCDC38-201ENST00000344280 KIAA1211LQ6NV74 962 aa20.21■□□□□ 0.83
CCDC38-201ENST00000344280 PODNL1Q6PEZ8 512 aa20.21■□□□□ 0.83
CCDC38-201ENST00000344280 CADM3Q8N126 398 aa20.21■□□□□ 0.83
CCDC38-201ENST00000344280 OR6T1Q8NGN1 323 aa20.21■□□□□ 0.83
CCDC38-201ENST00000344280 CNRIP1Q96F85 164 aaPredicted RBP20.21■□□□□ 0.83
CCDC38-201ENST00000344280 ABCB10Q9NRK6 738 aa20.21■□□□□ 0.83
CCDC38-201ENST00000344280 PHPT1Q9NRX4 125 aaPredicted RBP20.21■□□□□ 0.83
CCDC38-201ENST00000344280 FBXW2Q9UKT8 454 aa20.21■□□□□ 0.83
CCDC38-201ENST00000344280 DRD2P14416 443 aa20.2■□□□□ 0.82
CCDC38-201ENST00000344280 MAT2AP31153 395 aaKnown RBP20.2■□□□□ 0.82
CCDC38-201ENST00000344280 UGT2B15P54855 530 aa20.2■□□□□ 0.82
CCDC38-201ENST00000344280 SLC13A2Q13183 592 aa20.2■□□□□ 0.82
CCDC38-201ENST00000344280 KRT33BQ14525 404 aa20.2■□□□□ 0.82
CCDC38-201ENST00000344280 AGERQ15109 404 aa20.2■□□□□ 0.82
CCDC38-201ENST00000344280 ZIC1Q15915 447 aa20.2■□□□□ 0.82
CCDC38-201ENST00000344280 DUSP6Q16828 381 aa20.2■□□□□ 0.82
CCDC38-201ENST00000344280 C19orf48Q6RUI8 117 aa20.2■□□□□ 0.82
CCDC38-201ENST00000344280 RAB42Q8N4Z0 105 aa20.2■□□□□ 0.82
CCDC38-201ENST00000344280 ZNF513Q8N8E2 541 aaPredicted RBP20.2■□□□□ 0.82
CCDC38-201ENST00000344280 C16orf58Q96GQ5 468 aa20.2■□□□□ 0.82
CCDC38-201ENST00000344280 GPA33Q99795 319 aa20.2■□□□□ 0.82
CCDC38-201ENST00000344280 NXF2Q9GZY0 626 aaKnown RBP20.2■□□□□ 0.82
CCDC38-201ENST00000344280 MKRN2Q9H000 416 aaKnown RBP20.2■□□□□ 0.82
CCDC38-201ENST00000344280 ANKHQ9HCJ1 492 aa20.2■□□□□ 0.82
CCDC38-201ENST00000344280 PRDM7Q9NQW5 492 aa20.2■□□□□ 0.82
CCDC38-201ENST00000344280 MAN2C1Q9NTJ4 1040 aa20.2■□□□□ 0.82
CCDC38-201ENST00000344280 CHCHD3Q9NX63 227 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms