RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 METRNLQ641Q3 311 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 NR4A3Q92570 626 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 LRRC61Q9BV99 259 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 SORBS1Q9BX66 1292 aaKnown RBP12.16□□□□□ -0.46
LIN54-201ENST00000340417 TVP23BQ9NYZ1 205 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 EDARQ9UNE0 448 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 VDAC3Q9Y277 283 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 IGLV3-25P01717 112 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 ZNF20P17024 532 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 RPS6KA3P51812 740 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 DEFA1P59665 94 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 DEFA3P59666 94 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 TIMM50Q3ZCQ8 353 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 GARNL3Q5VVW2 1013 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 ALDH16A1Q8IZ83 802 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 OR4C15Q8NGM1 316 aa12.16□□□□□ -0.46
LIN54-201ENST00000340417 NANOS1Q8WY41 292 aaKnown RBP12.16□□□□□ -0.46
LIN54-201ENST00000340417 POLDIP3Q9BY77 421 aaKnown RBP12.16□□□□□ -0.46
LIN54-201ENST00000340417 HAT1O14929 419 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 TPOP07202 933 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 TMED1Q13445 227 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 ADRM1Q16186 407 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 EXT1Q16394 746 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 HES3Q5TGS1 186 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 GRAMD2AQ8IUY3 354 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 OR52R1Q8NGF1 315 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 MS4A4EQ96PG1 132 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 SH3GL2Q99962 352 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 CHMP1AQ9HD42 196 aaPredicted RBP12.15□□□□□ -0.46
LIN54-201ENST00000340417 TMEM5Q9Y2B1 443 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 H0YC42 278 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 ALOX12BO75342 701 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 ZNF821O75541 412 aaPredicted RBP12.15□□□□□ -0.46
LIN54-201ENST00000340417 BCKDHBP21953 392 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 GPR3P46089 330 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 GPR143P51810 404 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 MRPL28Q13084 256 aaKnown RBP12.15□□□□□ -0.46
LIN54-201ENST00000340417 TYSND1Q2T9J0 566 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 FAM180BQ6P0A1 224 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 AAGABQ6PD74 315 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 PKMYT1Q99640 499 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 HMGN1P05114 100 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 GPIP06744 558 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 OMPP47874 163 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 ST13P50502 369 aaKnown RBP12.15□□□□□ -0.46
LIN54-201ENST00000340417 HMGN2P46Q86SG4 172 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 RELL1Q8IUW5 271 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 CDRT4Q8N9R6 151 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 MYEOVQ96EZ4 313 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 OR5B2Q96R09 309 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 IGSF5Q9NSI5 407 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 TRPM7Q96QT4 1865 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 RAD1O60671 282 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 ADORA3P0DMS8 318 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 RPS26P62854 115 aaKnown RBP12.15□□□□□ -0.46
LIN54-201ENST00000340417 SIX1Q15475 284 aaPredicted RBP12.15□□□□□ -0.46
LIN54-201ENST00000340417 YOD1Q5VVQ6 348 aaPredicted RBP12.15□□□□□ -0.46
LIN54-201ENST00000340417 RASSF6Q6ZTQ3 369 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 KRT77Q7Z794 578 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 ZSCAN4Q8NAM6 433 aaPredicted RBP12.15□□□□□ -0.46
LIN54-201ENST00000340417 RASSF1Q9NS23 344 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 NENFQ9UMX5 172 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 FARSAQ9Y285 508 aaKnown RBP12.15□□□□□ -0.46
LIN54-201ENST00000340417 MYRFQ9Y2G1 1151 aa12.15□□□□□ -0.46
LIN54-201ENST00000340417 DBIP07108 87 aaKnown RBP12.15□□□□□ -0.47
LIN54-201ENST00000340417 CLUP10909 449 aa12.15□□□□□ -0.47
LIN54-201ENST00000340417 HIST1H1TP22492 207 aaPredicted RBP12.15□□□□□ -0.47
LIN54-201ENST00000340417 ERVPABLB-1P60509 514 aa12.15□□□□□ -0.47
LIN54-201ENST00000340417 ZNF551Q7Z340 670 aaPredicted RBP12.15□□□□□ -0.47
LIN54-201ENST00000340417 COQ8BQ96D53 544 aa12.15□□□□□ -0.47
LIN54-201ENST00000340417 CRELD1Q96HD1 420 aa12.15□□□□□ -0.47
LIN54-201ENST00000340417 CCDC86Q9H6F5 360 aaKnown RBP12.15□□□□□ -0.47
LIN54-201ENST00000340417 CISD3P0C7P0 127 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 GUSBP11Q6P575 273 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 FIP1L1Q6UN15 594 aaKnown RBP12.14□□□□□ -0.47
LIN54-201ENST00000340417 PEG10Q86TG7 708 aaKnown RBP12.14□□□□□ -0.47
LIN54-201ENST00000340417 COQ10AQ96MF6 247 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 DGCR6LQ9BY27 220 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 PCDHGA5Q9Y5G8 931 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 LINC00854A0A1B0GVQ3 168 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 DCDC2BA2VCK2 349 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 K7EQS6 105 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 PROM1O43490 865 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 NME1P15531 152 aaKnown RBP12.14□□□□□ -0.47
LIN54-201ENST00000340417 GSTM3P21266 225 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 PKLRP30613 574 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 MC3RP41968 323 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 RPL34P49207 117 aaKnown RBP12.14□□□□□ -0.47
LIN54-201ENST00000340417 NDUFAF6Q330K2 333 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 LRIF1Q5T3J3 769 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 APIPQ96GX9 242 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 A0A1W2PP18 115 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 EPHA8P29322 1005 aaPredicted RBP12.14□□□□□ -0.47
LIN54-201ENST00000340417 SLC6A6P31641 620 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 COX10Q12887 443 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 MED22Q15528 200 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 SLC5A12Q1EHB4 618 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 AGAP7PQ5VUJ5 663 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 AGAP4Q96P64 663 aa12.14□□□□□ -0.47
LIN54-201ENST00000340417 PLGRKTQ9HBL7 147 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms