RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 IGF2RP11717 2491 aa10.23□□□□□ -0.77
RTN3-201ENST00000338850 CHD6Q8TD26 2715 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 SLC35F4A4IF30 521 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 TMEM202A6NGA9 273 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 OR2AG2A6NM03 316 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 GPR89AB7ZAQ6 455 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 ARHGAP33O14559 1287 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 KLHL18O94889 574 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 MED26O95402 600 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 C6orf47O95873 294 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 SOD1P00441 154 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 RPN2P04844 631 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 CTSLP07711 333 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 GPR89BP0CG08 455 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 ETFAP13804 333 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 DDCP20711 480 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 KELP23276 732 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 TEAD1P28347 426 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 S100A5P33763 92 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 SOX6P35712 828 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 SLC19A1P41440 591 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 CRATP43155 626 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 PRIM2P49643 509 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 RGS6P49758 472 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 CRISP1P54107 249 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 IL1RL1Q01638 556 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 FOXC1Q12948 553 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 DDX39BQ13838 428 aaKnown RBP10.22□□□□□ -0.77
RTN3-201ENST00000338850 DGCR6Q14129 220 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 LAPTM4AQ15012 233 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 BCL2A1Q16548 175 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 MPEG1Q2M385 716 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 TMEM52BQ4KMG9 183 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 COLEC12Q5KU26 742 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 PRAMEF8Q5VWM4 474 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 PRAMEF7Q5VXH5 474 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 SLX4IPQ5VYV7 408 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 C12orf73Q69YU5 71 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 TMEM220Q6QAJ8 160 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 PAGE2Q7Z2X7 111 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 BTLAQ7Z6A9 289 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 SLC9B2Q86UD5 537 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 KRT73Q86Y46 540 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 DCUN1D3Q8IWE4 304 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 CADM3Q8N126 398 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 STX19Q8N4C7 294 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 FAM46DQ8NEK8 389 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 OR10Q1Q8NGQ4 319 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 OR2I1PQ8NGU4 316 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 OR2L2Q8NH16 312 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 NFKBIDQ8NI38 313 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 RAD51AP1Q96B01 352 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 TOE1Q96GM8 510 aaKnown RBP10.22□□□□□ -0.77
RTN3-201ENST00000338850 WDFY2Q96P53 400 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 KCNC2Q96PR1 638 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 TEFMQ96QE5 360 aaKnown RBP10.22□□□□□ -0.77
RTN3-201ENST00000338850 CDADC1Q9BWV3 514 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 NLNQ9BYT8 704 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 TRIM39Q9HCM9 518 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 DYRK4Q9NR20 520 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 ACSS1Q9NUB1 689 aaPredicted RBP10.22□□□□□ -0.77
RTN3-201ENST00000338850 CLN6Q9NWW5 311 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 TAS2R7Q9NYW3 318 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 CRNNQ9UBG3 495 aaPredicted RBP10.22□□□□□ -0.77
RTN3-201ENST00000338850 SEC14L4Q9UDX3 406 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 CD84Q9UIB8 345 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 TESMINQ9Y4I5 508 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 PCDH15Q96QU1 1955 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 PI4KAP42356 2102 aa10.22□□□□□ -0.77
RTN3-201ENST00000338850 A0A1W2PRB8 838 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 IRGMA1A4Y4 181 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 PRAMEF25A6NGN4 478 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 CCRL2O00421 344 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 HAT1O14929 419 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 MTX2O75431 263 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 GADD45GO95257 159 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 RECKO95980 971 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 IGLV3-19P01714 112 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 EPHX1P07099 455 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 GAAP10253 952 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 OSMP13725 252 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 SPINK2P20155 84 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 GADD45AP24522 165 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 MAOBP27338 520 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 TPP2P29144 1249 aaPredicted RBP10.21□□□□□ -0.77
RTN3-201ENST00000338850 PREPP48147 710 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 TPMTP51580 245 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 CDH12P55289 794 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 DEFA1P59665 94 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 DEFA3P59666 94 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 REEP5Q00765 189 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 C2orf80Q0P641 193 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 COX10Q12887 443 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 NCF4Q15080 339 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 OCLNQ16625 522 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 CCSMST1Q4G0I0 132 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 ARSIQ5FYB1 569 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 WDR45BQ5MNZ6 344 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 COX20Q5RI15 118 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 PRAMEF14Q5SWL7 426 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms