RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 ZNF705DP0CH99 300 aaPredicted RBP11.27□□□□□ -0.61
SHANK2-201ENST00000338508 ZNF705BP0CI00 300 aaPredicted RBP11.27□□□□□ -0.61
SHANK2-201ENST00000338508 CHRNB4P30926 498 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 MEX3BQ6ZN04 569 aaKnown RBP11.27□□□□□ -0.61
SHANK2-201ENST00000338508 BEST3Q8N1M1 668 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 CSNK1A1LQ8N752 337 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 DNAJB8Q8NHS0 232 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 DAZLQ92904 295 aaKnown RBP11.27□□□□□ -0.61
SHANK2-201ENST00000338508 TOMM40LQ969M1 308 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 BIRC7Q96CA5 298 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 FAM234AQ9H0X4 552 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 MAB21L2Q9Y586 359 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 MST1RQ04912 1400 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 KDELR3O43731 214 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 SYPP08247 313 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 AQP2P41181 271 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 ZNF763Q0D2J5 394 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 GBX1Q14549 363 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 KHDC1LQ5JSQ8 128 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 C9orf135Q5VTT2 229 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 ASRGL1Q7L266 308 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 BANPQ8N9N5 519 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 OR6C4Q8NGE1 309 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 CNIH3Q8TBE1 160 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 IL1F10Q8WWZ1 152 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 FAM46AQ96IP4 442 aaKnown RBP11.27□□□□□ -0.61
SHANK2-201ENST00000338508 FRMPD1Q5SYB0 1578 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 LRRC10BA6NIK2 292 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 CAPN3P20807 821 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 TAS2R43P59537 309 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 ABHD17BQ5VST6 288 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 C16orf78Q8WTQ4 265 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 FAM71F1Q96KD3 344 aaPredicted RBP11.27□□□□□ -0.61
SHANK2-201ENST00000338508 SECISBP2Q96T21 854 aaKnown RBP11.27□□□□□ -0.61
SHANK2-201ENST00000338508 H0Y8G0 127 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 DLGAP1O14490 977 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 ALDH3B1P43353 468 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 GSK3BP49841 420 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 SLC18A1P54219 525 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 RNF4P78317 190 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 PPP1R3AQ16821 1122 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 GPR149Q86SP6 731 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 SYT14Q8NB59 555 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 SUSD3Q96L08 255 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 STARD5Q9NSY2 213 aa11.27□□□□□ -0.61
SHANK2-201ENST00000338508 MEIS3P1A6NDR6 274 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 PRICKLE3O43900 615 aaPredicted RBP11.26□□□□□ -0.61
SHANK2-201ENST00000338508 TSPAN15O95858 294 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 ADRB3P13945 408 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 NDUFV2P19404 249 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 IL1R2P27930 398 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 DLSTP36957 453 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 NKPD1Q17RQ9 610 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 PLEKHN1Q494U1 663 aaPredicted RBP11.26□□□□□ -0.61
SHANK2-201ENST00000338508 MS4A13Q5J8X5 152 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 OR2T33Q8NG76 320 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 LIPHQ8WWY8 451 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 C22orf15Q8WYQ4 148 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 FUBP3Q96I24 572 aaKnown RBP eCLIP11.26□□□□□ -0.61
SHANK2-201ENST00000338508 SAMD11Q96NU1 681 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 SYNPO2LQ9H987 977 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 B4GALT6Q9UBX8 382 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.26□□□□□ -0.61
SHANK2-201ENST00000338508 UQCRC2P22695 453 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 GCH1P30793 250 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 PIK3CBP42338 1070 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 ACSBG2Q5FVE4 666 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 REEP4Q9H6H4 257 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 NUDT21O43809 227 aaKnown RBP11.26□□□□□ -0.61
SHANK2-201ENST00000338508 ZNF780AO75290 641 aaPredicted RBP11.26□□□□□ -0.61
SHANK2-201ENST00000338508 CRTAPO75718 401 aaPredicted RBP11.26□□□□□ -0.61
SHANK2-201ENST00000338508 VNN1O95497 513 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 RHOP08100 348 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 IL3P08700 152 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 ZNF30P17039 623 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 KCNC1P48547 511 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 PTH2RP49190 550 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 RPL11P62913 178 aaKnown RBP11.26□□□□□ -0.61
SHANK2-201ENST00000338508 DHCR24Q15392 516 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 AAK1Q2M2I8 961 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 RHBDD1Q8TEB9 315 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 CHPT1Q8WUD6 406 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 VSX1Q9NZR4 365 aaPredicted RBP11.26□□□□□ -0.61
SHANK2-201ENST00000338508 UBQLN2Q9UHD9 624 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 SCML2Q9UQR0 700 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 A0A1W2PQU0 124 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 HSPB6O14558 160 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 KIAA1614Q5VZ46 1190 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 PLEKHG7Q6ZR37 379 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 MCATQ8IVS2 390 aaKnown RBP11.26□□□□□ -0.61
SHANK2-201ENST00000338508 OR5H2Q8NGV7 314 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 LRCH3Q96II8 777 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 ACTR10Q9NZ32 417 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 GOSR2O14653 212 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 RCAN2Q14206 197 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 ZNF674Q2M3X9 581 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 NATD1Q8N6N6 113 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 OR51L1Q8NGJ5 315 aa11.26□□□□□ -0.61
SHANK2-201ENST00000338508 BSCL2Q96G97 398 aaPredicted RBP11.26□□□□□ -0.61
SHANK2-201ENST00000338508 CPEB1Q9BZB8 566 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms