RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 ZNF595Q8IYB9 648 aa13.79□□□□□ -0.2
CBX3-201ENST00000337620 ADGRG5Q8IZF4 528 aa13.79□□□□□ -0.2
CBX3-201ENST00000337620 GOLM1Q8NBJ4 401 aa13.79□□□□□ -0.2
CBX3-201ENST00000337620 NUP43Q8NFH3 380 aa13.79□□□□□ -0.2
CBX3-201ENST00000337620 SFXN5Q8TD22 340 aa13.79□□□□□ -0.2
CBX3-201ENST00000337620 MOAP1Q96BY2 351 aa13.79□□□□□ -0.2
CBX3-201ENST00000337620 DUS3LQ96G46 650 aaKnown RBP13.79□□□□□ -0.2
CBX3-201ENST00000337620 YIPF4Q9BSR8 244 aa13.79□□□□□ -0.2
CBX3-201ENST00000337620 EFHD1Q9BUP0 239 aa13.79□□□□□ -0.2
CBX3-201ENST00000337620 ZNF304Q9HCX3 659 aa13.79□□□□□ -0.2
CBX3-201ENST00000337620 PRTFDC1Q9NRG1 225 aa13.79□□□□□ -0.2
CBX3-201ENST00000337620 CCM2LQ9NUG4 571 aaPredicted RBP13.79□□□□□ -0.2
CBX3-201ENST00000337620 OCIAD1Q9NX40 245 aa13.79□□□□□ -0.2
CBX3-201ENST00000337620 NCDNQ9UBB6 729 aa13.79□□□□□ -0.2
CBX3-201ENST00000337620 TRPC4Q9UBN4 977 aa13.79□□□□□ -0.2
CBX3-201ENST00000337620 ANAPC2Q9UJX6 822 aa13.79□□□□□ -0.2
CBX3-201ENST00000337620 A0A1B0GX78 115 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 C4orf47A7E2U8 309 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 CTNSO60931 367 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 HMGN2P05204 90 aaKnown RBP13.78□□□□□ -0.2
CBX3-201ENST00000337620 UMPSP11172 480 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 MATN1P21941 496 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 AQP1P29972 269 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 PTDSS1P48651 473 aaKnown RBP13.78□□□□□ -0.2
CBX3-201ENST00000337620 BTG2P78543 158 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 VEZF1Q14119 521 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 LASP1Q14847 261 aaKnown RBP13.78□□□□□ -0.2
CBX3-201ENST00000337620 YOD1Q5VVQ6 348 aaPredicted RBP13.78□□□□□ -0.2
CBX3-201ENST00000337620 GALNT10Q86SR1 603 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 TMEM126BQ8IUX1 230 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 OR7G2Q8NG99 324 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 OR56A1Q8NGH5 318 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 NFKBIDQ8NI38 313 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 RAB8BQ92930 207 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 EQTNQ9NQ60 294 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 DCAF13Q9NV06 445 aaKnown RBP13.78□□□□□ -0.2
CBX3-201ENST00000337620 FAM86C1Q9NVL1 165 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 DDX18Q9NVP1 670 aaKnown RBP13.78□□□□□ -0.2
CBX3-201ENST00000337620 BLACEA4D250 179 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 EFCAB7A8K855 629 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 UPK1AO00322 258 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 OR10H2O60403 315 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 ATP1B1P05026 303 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 FBLP22087 321 aaKnown RBP13.78□□□□□ -0.2
CBX3-201ENST00000337620 KDELR2P33947 212 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 PCGF2P35227 344 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 ZFP36L1Q07352 338 aaKnown RBP13.78□□□□□ -0.2
CBX3-201ENST00000337620 RBBP4Q09028 425 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 TRA2AQ13595 282 aaKnown RBP eCLIP13.78□□□□□ -0.22e-11■■■■■ 49.5
CBX3-201ENST00000337620 SCARB2Q14108 478 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 MFSD4BQ5TF39 518 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 FAM111BQ6SJ93 734 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 ENPP6Q6UWR7 440 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 SLC44A2Q8IWA5 706 aaPredicted RBP13.78□□□□□ -0.2
CBX3-201ENST00000337620 PQLC1Q8N2U9 271 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 OR5D16Q8NGK9 328 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 OTUB1Q96FW1 271 aaPredicted RBP13.78□□□□□ -0.2
CBX3-201ENST00000337620 RNF145Q96MT1 663 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 OR51I1Q9H343 314 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 SERHL2Q9H4I8 314 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 TMEM38AQ9H6F2 299 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 SIDT1Q9NXL6 827 aaKnown RBP13.78□□□□□ -0.2
CBX3-201ENST00000337620 SRPK3Q9UPE1 567 aa13.78□□□□□ -0.2
CBX3-201ENST00000337620 TPST1O60507 370 aa13.77□□□□□ -0.21
CBX3-201ENST00000337620 NME6O75414 186 aaPredicted RBP13.77□□□□□ -0.21
CBX3-201ENST00000337620 TIPRLO75663 272 aa13.77□□□□□ -0.21
CBX3-201ENST00000337620 SCRG1O75711 98 aa13.77□□□□□ -0.21
CBX3-201ENST00000337620 TIAF1O95411 115 aa13.77□□□□□ -0.21
CBX3-201ENST00000337620 SLC35E2P0CK97 266 aa13.77□□□□□ -0.21
CBX3-201ENST00000337620 OR12D1P0DN82 309 aa13.77□□□□□ -0.21
CBX3-201ENST00000337620 MAOAP21397 527 aa13.77□□□□□ -0.21
CBX3-201ENST00000337620 CDK6Q00534 326 aa13.77□□□□□ -0.21
CBX3-201ENST00000337620 DSG2Q14126 1118 aa13.77□□□□□ -0.21
CBX3-201ENST00000337620 TRMT12Q53H54 448 aaKnown RBP13.77□□□□□ -0.21
CBX3-201ENST00000337620 ARHGAP40Q5TG30 622 aa13.77□□□□□ -0.21
CBX3-201ENST00000337620 PWWP2BQ6NUJ5 590 aa13.77□□□□□ -0.21
CBX3-201ENST00000337620 LRRC74BQ6ZQY2 392 aa13.77□□□□□ -0.21
CBX3-201ENST00000337620 PPP1R3BQ86XI6 285 aa13.77□□□□□ -0.21
CBX3-201ENST00000337620 LILRA2Q8N149 483 aa13.77□□□□□ -0.21
CBX3-201ENST00000337620 FAM86B1Q8N7N1 296 aa13.77□□□□□ -0.21
CBX3-201ENST00000337620 OR52E4Q8NGH9 312 aa13.77□□□□□ -0.21
CBX3-201ENST00000337620 OR10Q1Q8NGQ4 319 aa13.77□□□□□ -0.21
CBX3-201ENST00000337620 NRG4Q8WWG1 115 aa13.77□□□□□ -0.21
CBX3-201ENST00000337620 XAGE5Q8WWM1 108 aa13.77□□□□□ -0.21
CBX3-201ENST00000337620 C16orf58Q96GQ5 468 aa13.77□□□□□ -0.21
CBX3-201ENST00000337620 PRRX2Q99811 253 aa13.77□□□□□ -0.21
CBX3-201ENST00000337620 PKP2Q99959 881 aa13.77□□□□□ -0.21
CBX3-201ENST00000337620 ALOXE3Q9BYJ1 711 aa13.77□□□□□ -0.21
CBX3-201ENST00000337620 APMAPQ9HDC9 416 aa13.77□□□□□ -0.21
CBX3-201ENST00000337620 ARMC1Q9NVT9 282 aa13.77□□□□□ -0.21
CBX3-201ENST00000337620 COL5A1P20908 1838 aaPredicted RBP13.77□□□□□ -0.21
CBX3-201ENST00000337620 TGFBR3LH3BV60 316 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 PLOD2O00469 737 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 HMGN4O00479 90 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 PRKD3O94806 890 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 ZNF682O95780 498 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 ARAFP10398 606 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 BMP2P12643 396 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 HSD17B7P56937 341 aa13.76□□□□□ -0.21
CBX3-201ENST00000337620 CSRP2Q16527 193 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms