RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 DGAT2L6Q6ZPD8 337 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 TAOK1Q7L7X3 1001 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 PAGE2Q7Z2X7 111 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 GOLGA7Q7Z5G4 137 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 TMEM200AQ86VY9 491 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 DMRTC2Q8IXT2 367 aaPredicted RBP9.82□□□□□ -0.84
CAPN3-202ENST00000337571 FBXW8Q8N3Y1 598 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 OR4K14Q8NGD5 310 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 DOK4Q8TEW6 326 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 DIO2Q92813 273 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 LRRC46Q96FV0 321 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 TREX2Q9BQ50 279 aaPredicted RBP9.82□□□□□ -0.84
CAPN3-202ENST00000337571 LRRC1Q9BTT6 524 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 DOHHQ9BU89 302 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 WWTR1Q9GZV5 400 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 SEMA4BQ9NPR2 832 aaPredicted RBP9.82□□□□□ -0.84
CAPN3-202ENST00000337571 TNFRSF10DQ9UBN6 386 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 KCNN3Q9UGI6 736 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 LIPGQ9Y5X9 500 aa9.82□□□□□ -0.84
CAPN3-202ENST00000337571 ZNF407Q9C0G0 2248 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 A0A0A6YYD5 115 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 ESYT3A0FGR9 886 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 LRRC14BA6NHZ5 514 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 KLK8O60259 260 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 PRKRAO75569 313 aaKnown RBP9.81□□□□□ -0.84
CAPN3-202ENST00000337571 KRT38O76015 456 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 ZWINTO95229 277 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 SIX3O95343 332 aaPredicted RBP9.81□□□□□ -0.84
CAPN3-202ENST00000337571 GBAP04062 536 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 KLK1P06870 262 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 FBXO45P0C2W1 286 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 KRT15P19012 456 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 GDF1P27539 372 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 TMED10P49755 219 aaKnown RBP9.81□□□□□ -0.84
CAPN3-202ENST00000337571 XKP51811 444 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 TFF3Q07654 80 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 TOMM20Q15388 145 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 SF3B4Q15427 424 aaKnown RBP eCLIP9.81□□□□□ -0.84
CAPN3-202ENST00000337571 CCNYL2Q5T2Q4 361 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 C10orf62Q5T681 223 aaPredicted RBP9.81□□□□□ -0.84
CAPN3-202ENST00000337571 OR52E8Q6IFG1 317 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 PTGR2Q8N8N7 351 aaPredicted RBP9.81□□□□□ -0.84
CAPN3-202ENST00000337571 L3MBTL4Q8NA19 623 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 ACBD4Q8NC06 268 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 OR10G3Q8NGC4 313 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 WDR20Q8TBZ3 569 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 TP53INP1Q96A56 240 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 PHF21BQ96EK2 531 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 CDK15Q96Q40 435 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 ELOVL6Q9H5J4 265 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 ACKR4Q9NPB9 350 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 NMRK1Q9NWW6 199 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 QPCTLQ9NXS2 382 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 PCDHGB3Q9Y5G1 929 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 AKAP9Q99996 3911 aa9.81□□□□□ -0.84
CAPN3-202ENST00000337571 A0A0G2JNJ9 132 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 HMX2A2RU54 273 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 ANKRD33BA6NCL7 494 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 WASHC1A8K0Z3 465 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 HSPB2A8KAH6 182 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 AHRRA9YTQ3 701 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 OR7A17O14581 309 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 PGRMC2O15173 223 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 TMPRSS11DO60235 418 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 SEMA3DO95025 777 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 SNX4O95219 450 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 NADKO95544 446 aaPredicted RBP9.8□□□□□ -0.84
CAPN3-202ENST00000337571 AIFM1O95831 613 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 ALDOAP04075 364 aaKnown RBP9.8□□□□□ -0.84
CAPN3-202ENST00000337571 RFPL3SP0C7P2 107 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 IGFBP2P18065 325 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 NT5EP21589 574 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 MASP1P48740 699 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 TRPC1P48995 793 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 SERPINB9P50453 376 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 GUCA2AQ02747 115 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 EBPQ15125 230 aaKnown RBP9.8□□□□□ -0.84
CAPN3-202ENST00000337571 HSPB2Q16082 182 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 NTRK2Q16620 822 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 TSNAXIP1Q2TAA8 658 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 SLC25A35Q3KQZ1 300 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 FRG2Q64ET8 278 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 MRM1Q6IN84 353 aaKnown RBP9.8□□□□□ -0.84
CAPN3-202ENST00000337571 ZNF572Q7Z3I7 529 aaPredicted RBP9.8□□□□□ -0.84
CAPN3-202ENST00000337571 WDR53Q7Z5U6 358 aaPredicted RBP9.8□□□□□ -0.84
CAPN3-202ENST00000337571 MILR1Q7Z6M3 343 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 GALNT12Q8IXK2 581 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 LRRC25Q8N386 305 aaPredicted RBP9.8□□□□□ -0.84
CAPN3-202ENST00000337571 NEIL3Q8TAT5 605 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 ZNF597Q96LX8 424 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 GPR78Q96P69 363 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 FRG2BQ96QU4 278 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 NTMT1Q9BV86 223 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 OR10A5Q9H207 317 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 ACSS3Q9H6R3 686 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 ZNF703Q9H7S9 590 aaPredicted RBP9.8□□□□□ -0.84
CAPN3-202ENST00000337571 CXorf21Q9HAI6 301 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 SH2D2AQ9NP31 389 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 ZDHHC18Q9NUE0 388 aa9.8□□□□□ -0.84
CAPN3-202ENST00000337571 Q9UFV3 132 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms