RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 ARL15Q9NXU5 204 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 GSTK1Q9Y2Q3 226 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 RPL36Q9Y3U8 105 aaKnown RBP17.25■□□□□ 0.35
PKP3-201ENST00000331563 ACRP10323 421 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 STOMP27105 288 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 CTBP2P56545 445 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 RPS24P62847 133 aaKnown RBP17.25■□□□□ 0.35
PKP3-201ENST00000331563 ZNF91Q05481 1191 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 MEDAGQ5VYS4 303 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 DDX53Q86TM3 631 aaKnown RBP17.25■□□□□ 0.35
PKP3-201ENST00000331563 RBFAQ8N0V3 343 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 ZNF655Q8N720 491 aaPredicted RBP17.25■□□□□ 0.35
PKP3-201ENST00000331563 LKAAEAR1Q8TD35 194 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 GTPBP1O00178 669 aaKnown RBP17.25■□□□□ 0.35
PKP3-201ENST00000331563 YY2O15391 372 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 INSIG1O15503 277 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 S100A6P06703 90 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 IGFBP1P08833 259 aaPredicted RBP17.25■□□□□ 0.35
PKP3-201ENST00000331563 FAM157BP0CG42 384 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 SLC6A4P31645 630 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 BMP8BP34820 402 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 CENPAP49450 140 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 WNT3P56703 355 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 RPS25P62851 125 aaKnown RBP17.25■□□□□ 0.35
PKP3-201ENST00000331563 ZNF169Q14929 603 aaPredicted RBP17.25■□□□□ 0.35
PKP3-201ENST00000331563 BMP8AQ7Z5Y6 402 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 TCEANCQ8N8B7 351 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 OR11H4Q8NGC9 324 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 CSGALNACT1Q8TDX6 532 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 ATOH1Q92858 354 aaPredicted RBP17.25■□□□□ 0.35
PKP3-201ENST00000331563 P2RY12Q9H244 342 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 NMNAT1Q9HAN9 279 aaPredicted RBP17.25■□□□□ 0.35
PKP3-201ENST00000331563 FTSJ1Q9UET6 329 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 PCDHB1Q9Y5F3 818 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 KCNMB2Q9Y691 235 aa17.25■□□□□ 0.35
PKP3-201ENST00000331563 TMEM229AB2RXF0 380 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 SLC30A4O14863 429 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 NCR1O76036 304 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 APOL3O95236 402 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 TRBC1P01850 177 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 FCER2P06734 321 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 ZNF7P17097 686 aaPredicted RBP17.24■□□□□ 0.35
PKP3-201ENST00000331563 AMD1P17707 334 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 STK19P49842 368 aaPredicted RBP17.24■□□□□ 0.35
PKP3-201ENST00000331563 RPL6Q02878 288 aaKnown RBP17.24■□□□□ 0.35
PKP3-201ENST00000331563 MTAPQ13126 283 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 BHLHB9Q6PI77 547 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 FAM151BQ6UXP7 276 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 PIP5K1AQ99755 562 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 DUSP26Q9BV47 211 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 MS4A7Q9GZW8 240 aaPredicted RBP17.24■□□□□ 0.35
PKP3-201ENST00000331563 CWH43Q9H720 699 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 SLC25A19Q9HC21 320 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 ACER3Q9NUN7 267 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 FAM120CQ9NX05 1096 aaKnown RBP17.24■□□□□ 0.35
PKP3-201ENST00000331563 BAIAP2Q9UQB8 552 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 AKAP8O43823 692 aaKnown RBP17.24■□□□□ 0.35
PKP3-201ENST00000331563 DHFRP00374 187 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 ACSM4P0C7M7 580 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 ANXA3P12429 323 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 ETFAP13804 333 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 PCGF2P35227 344 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 SGSHP51688 502 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 DUSP6Q16828 381 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 SMG7Q92540 1137 aaKnown RBP17.24■□□□□ 0.35
PKP3-201ENST00000331563 TM9SF4Q92544 642 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 ADGRE3Q9BY15 652 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 CDCP1Q9H5V8 836 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 BRD7Q9NPI1 651 aa17.24■□□□□ 0.35
PKP3-201ENST00000331563 C2orf78A6NCI8 922 aa17.23■□□□□ 0.35
PKP3-201ENST00000331563 ANKRD66B4E2M5 251 aa17.23■□□□□ 0.35
PKP3-201ENST00000331563 GCM2O75603 506 aaPredicted RBP17.23■□□□□ 0.35
PKP3-201ENST00000331563 HLA-DQB1P01920 261 aa17.23■□□□□ 0.35
PKP3-201ENST00000331563 ANXA5P08758 320 aa17.23■□□□□ 0.35
PKP3-201ENST00000331563 AGFG1P52594 562 aaKnown RBP17.23■□□□□ 0.35
PKP3-201ENST00000331563 YBEYP58557 167 aaPredicted RBP17.23■□□□□ 0.35
PKP3-201ENST00000331563 CSTF1Q05048 431 aaKnown RBP17.23■□□□□ 0.35
PKP3-201ENST00000331563 RBBP4Q09028 425 aa17.23■□□□□ 0.35
PKP3-201ENST00000331563 TWF1Q12792 350 aa17.23■□□□□ 0.35
PKP3-201ENST00000331563 OTOP2Q7RTS6 562 aa17.23■□□□□ 0.35
PKP3-201ENST00000331563 POF1BQ8WVV4 589 aa17.23■□□□□ 0.35
PKP3-201ENST00000331563 SLC9A6Q92581 669 aa17.23■□□□□ 0.35
PKP3-201ENST00000331563 IGSF21Q96ID5 467 aa17.23■□□□□ 0.35
PKP3-201ENST00000331563 SAMD11Q96NU1 681 aa17.23■□□□□ 0.35
PKP3-201ENST00000331563 C1QTNF6Q9BXI9 259 aa17.23■□□□□ 0.35
PKP3-201ENST00000331563 GPR63Q9BZJ6 419 aa17.23■□□□□ 0.35
PKP3-201ENST00000331563 ZFP64Q9NPA5 681 aa17.23■□□□□ 0.35
PKP3-201ENST00000331563 OLFM2O95897 454 aa17.23■□□□□ 0.35
PKP3-201ENST00000331563 CACNG1Q06432 222 aa17.23■□□□□ 0.35
PKP3-201ENST00000331563 RNF165Q6ZSG1 346 aa17.23■□□□□ 0.35
PKP3-201ENST00000331563 C16orf59Q7L2K0 433 aa17.23■□□□□ 0.35
PKP3-201ENST00000331563 NFKBIDQ8NI38 313 aa17.23■□□□□ 0.35
PKP3-201ENST00000331563 COL4A4P53420 1690 aaPredicted RBP17.23■□□□□ 0.35
PKP3-201ENST00000331563 SCN2BO60939 215 aa17.22■□□□□ 0.35
PKP3-201ENST00000331563 LDOC1O95751 146 aaPredicted RBP17.22■□□□□ 0.35
PKP3-201ENST00000331563 KLKB1P03952 638 aa17.22■□□□□ 0.35
PKP3-201ENST00000331563 HSF2Q03933 536 aa17.22■□□□□ 0.35
PKP3-201ENST00000331563 PLD1Q13393 1074 aa17.22■□□□□ 0.35
PKP3-201ENST00000331563 SERPINA9Q86WD7 417 aa17.22■□□□□ 0.35
PKP3-201ENST00000331563 LAS2Q8IYD9 372 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms