RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 C19orf47Q8N9M1 422 aaKnown RBP19.11■□□□□ 0.65
RIPPLY3-201ENST00000329553 ZNF681Q96N22 645 aa19.11■□□□□ 0.65
RIPPLY3-201ENST00000329553 RBM4BQ9BQ04 359 aaKnown RBP19.11■□□□□ 0.65
RIPPLY3-201ENST00000329553 RBM4Q9BWF3 364 aaKnown RBP19.11■□□□□ 0.65
RIPPLY3-201ENST00000329553 IL1RAPQ9NPH3 570 aa19.11■□□□□ 0.65
RIPPLY3-201ENST00000329553 DAPP1Q9UN19 280 aa19.11■□□□□ 0.65
RIPPLY3-201ENST00000329553 ENTPD4Q9Y227 616 aa19.11■□□□□ 0.65
RIPPLY3-201ENST00000329553 PCDHGA8Q9Y5G5 932 aa19.11■□□□□ 0.65
RIPPLY3-201ENST00000329553 CPN2P22792 545 aa19.1■□□□□ 0.65
RIPPLY3-201ENST00000329553 OLR1P78380 273 aa19.1■□□□□ 0.65
RIPPLY3-201ENST00000329553 SRSF5Q13243 272 aaKnown RBP19.1■□□□□ 0.65
RIPPLY3-201ENST00000329553 TP53BP2Q13625 1128 aa19.1■□□□□ 0.65
RIPPLY3-201ENST00000329553 ZNF630Q2M218 657 aaPredicted RBP19.1■□□□□ 0.65
RIPPLY3-201ENST00000329553 FAM92BQ6ZTR7 304 aa19.1■□□□□ 0.65
RIPPLY3-201ENST00000329553 HS3ST5Q8IZT8 346 aa19.1■□□□□ 0.65
RIPPLY3-201ENST00000329553 SHISA5Q8N114 240 aa19.1■□□□□ 0.65
RIPPLY3-201ENST00000329553 TPD52L3Q96J77 140 aa19.1■□□□□ 0.65
RIPPLY3-201ENST00000329553 C10orf90Q96M02 699 aa19.1■□□□□ 0.65
RIPPLY3-201ENST00000329553 ZNF860A6NHJ4 632 aa19.1■□□□□ 0.65
RIPPLY3-201ENST00000329553 GNGT2O14610 69 aa19.1■□□□□ 0.65
RIPPLY3-201ENST00000329553 INHBBP09529 407 aa19.1■□□□□ 0.65
RIPPLY3-201ENST00000329553 CSNK2A2P19784 350 aaPredicted RBP19.1■□□□□ 0.65
RIPPLY3-201ENST00000329553 PIGAP37287 484 aa19.1■□□□□ 0.65
RIPPLY3-201ENST00000329553 TNFRSF17Q02223 184 aa19.1■□□□□ 0.65
RIPPLY3-201ENST00000329553 SLC25A45Q8N413 288 aa19.1■□□□□ 0.65
RIPPLY3-201ENST00000329553 TANKQ92844 425 aa19.1■□□□□ 0.65
RIPPLY3-201ENST00000329553 CCDC3Q9BQI4 270 aa19.1■□□□□ 0.65
RIPPLY3-201ENST00000329553 PHF11Q9UIL8 331 aa19.1■□□□□ 0.65
RIPPLY3-201ENST00000329553 PCDH15Q96QU1 1955 aa19.1■□□□□ 0.65
RIPPLY3-201ENST00000329553 SUV39H1O43463 412 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 FOXD2O60548 495 aaPredicted RBP19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 BUD31P41223 144 aaPredicted RBP19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 DHPSP49366 369 aaPredicted RBP19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 NFATC3Q12968 1075 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 PPP1R8Q12972 351 aaKnown RBP19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 CEBPEQ15744 281 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 C6orf141Q5SZD1 244 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 CCDC80Q76M96 950 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 MCATQ8IVS2 390 aaKnown RBP19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 CHDHQ8NE62 594 aaPredicted RBP19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 TMEM131Q92545 1883 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 RAB8BQ92930 207 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 MAGED4Q96JG8 741 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 CSF3RQ99062 836 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 SERHL2Q9H4I8 314 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 ADPRHL2Q9NX46 363 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 PSME2Q9UL46 239 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 ABCG2Q9UNQ0 655 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 M0QX08 132 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 NOL3O60936 208 aaKnown RBP19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 OPN1SWP03999 348 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 IL7RP16871 459 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 ZNF10P21506 573 aaPredicted RBP19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 VLDLRP98155 873 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 TMED1Q13445 227 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 ZNF829Q3KNS6 432 aaPredicted RBP19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 GTF2IRD2BQ6EKJ0 949 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 GTF2IRD2Q86UP8 949 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 SPARTQ8N0X7 666 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 ZNF555Q8NEP9 628 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 OR5K1Q8NHB7 308 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 TAMM41Q96BW9 452 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 ADNPQ9H2P0 1102 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 ERVMER34-1Q9H9K5 563 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 ZCCHC3Q9NUD5 404 aaKnown RBP19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 ZNF780BQ9Y6R6 833 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 SCN2AQ99250 2005 aa19.09■□□□□ 0.65
RIPPLY3-201ENST00000329553 hCG_2039718K7EN88 272 aa19.08■□□□□ 0.65
RIPPLY3-201ENST00000329553 TDGF1P13385 188 aa19.08■□□□□ 0.65
RIPPLY3-201ENST00000329553 CCNA2P20248 432 aa19.08■□□□□ 0.65
RIPPLY3-201ENST00000329553 MPIP34949 423 aa19.08■□□□□ 0.65
RIPPLY3-201ENST00000329553 CTSKP43235 329 aa19.08■□□□□ 0.65
RIPPLY3-201ENST00000329553 PPM1FP49593 454 aaPredicted RBP19.08■□□□□ 0.65
RIPPLY3-201ENST00000329553 GABARAPL2P60520 117 aa19.08■□□□□ 0.65
RIPPLY3-201ENST00000329553 SELENOWP63302 87 aa19.08■□□□□ 0.65
RIPPLY3-201ENST00000329553 KCNJ10P78508 379 aa19.08■□□□□ 0.65
RIPPLY3-201ENST00000329553 BNC1Q01954 994 aa19.08■□□□□ 0.65
RIPPLY3-201ENST00000329553 KCNAB2Q13303 367 aa19.08■□□□□ 0.65
RIPPLY3-201ENST00000329553 GPR19Q15760 415 aa19.08■□□□□ 0.65
RIPPLY3-201ENST00000329553 LYSMD4Q5XG99 296 aa19.08■□□□□ 0.65
RIPPLY3-201ENST00000329553 Q6ZNX1 250 aa19.08■□□□□ 0.65
RIPPLY3-201ENST00000329553 SZRD1Q7Z422 152 aa19.08■□□□□ 0.65
RIPPLY3-201ENST00000329553 TMEM179BQ7Z7N9 219 aa19.08■□□□□ 0.65
RIPPLY3-201ENST00000329553 DNAJC22Q8N4W6 341 aa19.08■□□□□ 0.65
RIPPLY3-201ENST00000329553 NRBF2Q96F24 287 aa19.08■□□□□ 0.65
RIPPLY3-201ENST00000329553 DOHHQ9BU89 302 aa19.08■□□□□ 0.65
RIPPLY3-201ENST00000329553 LHPPQ9H008 270 aa19.08■□□□□ 0.65
RIPPLY3-201ENST00000329553 GIMAP4Q9NUV9 329 aa19.08■□□□□ 0.65
RIPPLY3-201ENST00000329553 NAALAD2Q9Y3Q0 740 aa19.08■□□□□ 0.65
RIPPLY3-201ENST00000329553 SLC22A7Q9Y694 548 aa19.08■□□□□ 0.65
RIPPLY3-201ENST00000329553 RNF215Q9Y6U7 377 aa19.08■□□□□ 0.65
RIPPLY3-201ENST00000329553 RHPN2P1A8MT19 583 aa19.08■□□□□ 0.64
RIPPLY3-201ENST00000329553 HMGN4O00479 90 aa19.08■□□□□ 0.64
RIPPLY3-201ENST00000329553 FABP3P05413 133 aa19.08■□□□□ 0.64
RIPPLY3-201ENST00000329553 ALDH4A1P30038 563 aa19.08■□□□□ 0.64
RIPPLY3-201ENST00000329553 DCTP40126 519 aa19.08■□□□□ 0.64
RIPPLY3-201ENST00000329553 GFERP55789 205 aa19.08■□□□□ 0.64
RIPPLY3-201ENST00000329553 PCBP3P57721 371 aaKnown RBP19.08■□□□□ 0.64
RIPPLY3-201ENST00000329553 SIM1P81133 766 aaPredicted RBP19.08■□□□□ 0.64
RIPPLY3-201ENST00000329553 SIGLEC14Q08ET2 396 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms