RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 ETV5P41161 510 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 TSPAN7P41732 249 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 ARSFP54793 590 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 FOLH1Q04609 750 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 MED21Q13503 144 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 IL11RAQ14626 422 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 NDUFAF5Q5TEU4 345 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 C1orf189Q5VU69 101 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 YOD1Q5VVQ6 348 aaPredicted RBP17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 C18orf63Q68DL7 685 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 ZBTB49Q6ZSB9 765 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 FKBP9P1Q75LS8 142 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 RAB11FIP2Q7L804 512 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 PTOV1Q86YD1 416 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 OR52N2Q8NGI0 321 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 OR5P2Q8WZ92 322 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 MMABQ96EY8 250 aaPredicted RBP17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 ZNF597Q96LX8 424 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 CSF3RQ99062 836 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 BDH2Q9BUT1 245 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 C9orf16Q9BUW7 83 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 FAIM2Q9BWQ8 316 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 FBXO8Q9NRD0 319 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 SLC39A1Q9NY26 324 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 SAMD4AQ9UPU9 718 aaKnown RBP17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 MAU2Q9Y6X3 613 aa17.65■□□□□ 0.42
EXOSC3-201ENST00000327304 DSCR3O14972 297 aa17.64■□□□□ 0.41
EXOSC3-201ENST00000327304 PDPK1O15530 556 aa17.64■□□□□ 0.41
EXOSC3-201ENST00000327304 PROM1O43490 865 aa17.64■□□□□ 0.41
EXOSC3-201ENST00000327304 CHST10O43529 356 aa17.64■□□□□ 0.41
EXOSC3-201ENST00000327304 DENRO43583 198 aaKnown RBP17.64■□□□□ 0.41
EXOSC3-201ENST00000327304 C1QCP02747 245 aa17.64■□□□□ 0.41
EXOSC3-201ENST00000327304 AVPR1BP47901 424 aa17.64■□□□□ 0.41
EXOSC3-201ENST00000327304 ALDH9A1P49189 494 aa17.64■□□□□ 0.41
EXOSC3-201ENST00000327304 MAT1AQ00266 395 aaKnown RBP17.64■□□□□ 0.41
EXOSC3-201ENST00000327304 FADDQ13158 208 aa17.64■□□□□ 0.41
EXOSC3-201ENST00000327304 ADRM1Q16186 407 aa17.64■□□□□ 0.41
EXOSC3-201ENST00000327304 SLC38A9Q8NBW4 561 aa17.64■□□□□ 0.41
EXOSC3-201ENST00000327304 FBXO30Q8TB52 745 aa17.64■□□□□ 0.41
EXOSC3-201ENST00000327304 CIB1Q99828 191 aa17.64■□□□□ 0.41
EXOSC3-201ENST00000327304 SLC35A5Q9BS91 424 aa17.64■□□□□ 0.41
EXOSC3-201ENST00000327304 NPLQ9BXD5 320 aaPredicted RBP17.64■□□□□ 0.41
EXOSC3-201ENST00000327304 LYRM4Q9HD34 91 aa17.64■□□□□ 0.41
EXOSC3-201ENST00000327304 SRPK3Q9UPE1 567 aa17.64■□□□□ 0.41
EXOSC3-201ENST00000327304 WASHC1A8K0Z3 465 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 SERPINA1P01009 418 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 OR1D4P47884 311 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 PCBP4P57723 403 aaKnown RBP17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 SKP1P63208 163 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 VAC14Q08AM6 782 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 MLC1Q15049 377 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 SYT16Q17RD7 645 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 RHBDD2Q6NTF9 364 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 BPHLQ86WA6 291 aaPredicted RBP17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 GALNT4Q8N4A0 578 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 PNPT1Q8TCS8 783 aaKnown RBP17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 SLC47A1Q96FL8 570 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 NEUROD4Q9HD90 331 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 ACSS1Q9NUB1 689 aaPredicted RBP17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 C5AR2Q9P296 337 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 PHF11Q9UIL8 331 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 V9GYQ6 96 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 CCDC187A0A096LP49 1063 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 A0A1B0GX78 115 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 FAM149AA5PLN7 773 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 GLOD5A6NK44 160 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 H0YIG0 161 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 CLOCKO15516 846 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 DEAF1O75398 565 aaPredicted RBP17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 PRKD3O94806 890 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 PRSS23O95084 383 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 KRT75O95678 551 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 NTRK1P04629 796 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 UQCRC2P22695 453 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 CPN2P22792 545 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 MVDP53602 400 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 SHC2P98077 582 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 TNFRSF17Q02223 184 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 RSPO4Q2I0M5 234 aaPredicted RBP17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 NIPAL1Q6NVV3 410 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 ENPP6Q6UWR7 440 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 MARCH9Q86YJ5 346 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 MVB12AQ96EY5 273 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 PYURFQ96I23 114 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 TRIM4Q9C037 500 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 SLC7A5P2Q9GIP4 190 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 FER1L5A0AVI2 2057 aa17.63■□□□□ 0.41
EXOSC3-201ENST00000327304 CFAP54Q96N23 3096 aa17.62■□□□□ 0.41
EXOSC3-201ENST00000327304 FAM227AF5H4B4 570 aa17.62■□□□□ 0.41
EXOSC3-201ENST00000327304 PGRMC2O15173 223 aa17.62■□□□□ 0.41
EXOSC3-201ENST00000327304 NR2F6P10588 404 aa17.62■□□□□ 0.41
EXOSC3-201ENST00000327304 ZNF28P17035 718 aa17.62■□□□□ 0.41
EXOSC3-201ENST00000327304 KDELR2P33947 212 aa17.62■□□□□ 0.41
EXOSC3-201ENST00000327304 MAPK10P53779 464 aa17.62■□□□□ 0.41
EXOSC3-201ENST00000327304 RBBP4Q09028 425 aa17.62■□□□□ 0.41
EXOSC3-201ENST00000327304 FAM86B1Q8N7N1 296 aa17.62■□□□□ 0.41
EXOSC3-201ENST00000327304 GATA6Q92908 595 aa17.62■□□□□ 0.41
EXOSC3-201ENST00000327304 ZBED6CLQ96FA7 236 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms