RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 GPR179Q6PRD1 2367 aa17.31■□□□□ 0.36
USP39-201ENST00000323701 LY6G6EA0A0G2JKS1 128 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 TMEM221A6NGB7 291 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 M0R296 226 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 RECKO95980 971 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 ATXN8OSP0DMR3 200 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 ZNF10P21506 573 aaPredicted RBP17.3■□□□□ 0.36
USP39-201ENST00000323701 FUT4P22083 530 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 MAT1AQ00266 395 aaKnown RBP17.3■□□□□ 0.36
USP39-201ENST00000323701 FUT5Q11128 374 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 DUSP7Q16829 419 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 CRB2Q5IJ48 1285 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 REEP3Q6NUK4 255 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 TMEM64Q6YI46 380 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 CEP68Q76N32 757 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 TMPRSS9Q7Z410 1059 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 STK32CQ86UX6 486 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 LRRC25Q8N386 305 aaPredicted RBP17.3■□□□□ 0.36
USP39-201ENST00000323701 SAP25Q8TEE9 199 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 XAGE5Q8WWM1 108 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 AHCYL2Q96HN2 611 aaKnown RBP17.3■□□□□ 0.36
USP39-201ENST00000323701 RAB33BQ9H082 229 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 HCN3Q9P1Z3 774 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 TRPC4Q9UBN4 977 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 SCOCQ9UIL1 159 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 PSME2Q9UL46 239 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 U3KQA8 63 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 A0A1B0GTQ1 180 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 MAGEA13PA6NCF6 341 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 CHST10O43529 356 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 SRPX2O60687 465 aaPredicted RBP17.3■□□□□ 0.36
USP39-201ENST00000323701 SNAP29O95721 258 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 CFIP05156 583 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 MATN1P21941 496 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 DCTP40126 519 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 RNF220Q5VTB9 566 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 UGT2A3Q6UWM9 527 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 HMGN2P46Q86SG4 172 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 CHERPQ8IWX8 916 aaKnown RBP17.3■□□□□ 0.36
USP39-201ENST00000323701 PACRGLQ8N7B6 248 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 GIMAP5Q96F15 307 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 ZDHHC12Q96GR4 267 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 ANKHQ9HCJ1 492 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 SEMA3GQ9NS98 782 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 GIMAP4Q9NUV9 329 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 ADPRHL2Q9NX46 363 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 MS4A12Q9NXJ0 267 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 SEC16AO15027 2179 aa17.3■□□□□ 0.36
USP39-201ENST00000323701 NINQ8N4C6 2090 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 GNGT2O14610 69 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 PGM3O95394 542 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 FABP3P05413 133 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 CPMP14384 443 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 TLX1P31314 330 aaPredicted RBP17.29■□□□□ 0.36
USP39-201ENST00000323701 PRAMEF17Q5VTA0 474 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 FOXB2Q5VYV0 432 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 MARVELD2Q8N4S9 558 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 TFAP2CQ92754 450 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 CCDC74AQ96AQ1 378 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 NUDT22Q9BRQ3 303 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 PDE7BQ9NP56 450 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 A8MU76 341 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 G3V2T6 193 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 ZBTB11O95625 1053 aaPredicted RBP17.29■□□□□ 0.36
USP39-201ENST00000323701 CLIC3O95833 236 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 ALPLP05186 524 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 LYNP07948 512 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 FHP07954 510 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 NELFEP18615 380 aaKnown RBP17.29■□□□□ 0.36
USP39-201ENST00000323701 ARSFP54793 590 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 ERV3-1Q14264 604 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 LPAL2Q16609 132 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 TRMT12Q53H54 448 aaKnown RBP17.29■□□□□ 0.36
USP39-201ENST00000323701 DGAT2L6Q6ZPD8 337 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 NUP43Q8NFH3 380 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 SFXN5Q8TD22 340 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 ANKRD9Q96BM1 317 aaPredicted RBP17.29■□□□□ 0.36
USP39-201ENST00000323701 NR1H4Q96RI1 486 aaPredicted RBP17.29■□□□□ 0.36
USP39-201ENST00000323701 WFDC6Q9BQY6 131 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 PLCL2Q9UPR0 1127 aa17.29■□□□□ 0.36
USP39-201ENST00000323701 HYKKA2RU49 373 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 H3BMH7 237 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 TGFBR3LH3BV60 316 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 CDC123O75794 336 aaPredicted RBP17.28■□□□□ 0.36
USP39-201ENST00000323701 YAP1P46937 504 aaKnown RBP17.28■□□□□ 0.36
USP39-201ENST00000323701 MAN2A2P49641 1150 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 OR2T5Q6IEZ7 315 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 GUSBP11Q6P575 273 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 COMTD1Q86VU5 262 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 DTWD2Q8NBA8 298 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 OR2T29Q8NH02 315 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 SPPL2AQ8TCT8 520 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 RNF31Q96EP0 1072 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 TREX2Q9BQ50 279 aaPredicted RBP17.28■□□□□ 0.36
USP39-201ENST00000323701 OSBPL11Q9BXB4 747 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 GAREM1Q9H706 876 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 ZSCAN32Q9NX65 697 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 NLGN3Q9NZ94 848 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 NDUFAF4Q9P032 175 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms