RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 MRPL14Q6P1L8 145 aaKnown RBP25.69■■□□□ 1.7
CTDNEP1-201ENST00000318988 PLPP5Q8NEB5 264 aa25.69■■□□□ 1.7
CTDNEP1-201ENST00000318988 METTL21AQ8WXB1 218 aa25.69■■□□□ 1.7
CTDNEP1-201ENST00000318988 KAT2AQ92830 837 aa25.69■■□□□ 1.7
CTDNEP1-201ENST00000318988 RIT1Q92963 219 aa25.69■■□□□ 1.7
CTDNEP1-201ENST00000318988 SLC46A1Q96NT5 459 aa25.69■■□□□ 1.7
CTDNEP1-201ENST00000318988 ECSITQ9BQ95 431 aa25.69■■□□□ 1.7
CTDNEP1-201ENST00000318988 SEC16AO15027 2179 aa25.69■■□□□ 1.7
CTDNEP1-201ENST00000318988 TGFBR3LH3BV60 316 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 DYRK3O43781 588 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 SLC5A2P31639 672 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 MC3RP41968 323 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 EMP2P54851 167 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 NCF4Q15080 339 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 RABL3Q5HYI8 236 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 SAMD4BQ5PRF9 694 aaKnown RBP25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 FAM198BQ6UWH4 519 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 TMEM64Q6YI46 380 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 ZNF517Q6ZMY9 492 aaPredicted RBP25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 SLC15A3Q8IY34 581 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 CLEC4FQ8N1N0 589 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 SFXN5Q8TD22 340 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 ZFP90Q8TF47 636 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 TSLPQ969D9 159 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 TMEM125Q96AQ2 219 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 ELP4Q96EB1 424 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 CPPED1Q9BRF8 314 aaPredicted RBP25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 CRB3Q9BUF7 120 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 TRIM8Q9BZR9 551 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 RAD21L1Q9H4I0 556 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 PNO1Q9NRX1 252 aaKnown RBP25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 ZCCHC3Q9NUD5 404 aaKnown RBP25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 DDX18Q9NVP1 670 aaKnown RBP25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 TMEM181Q9P2C4 612 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 C3orf18Q9UK00 162 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 IDSB3KWA1 339 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 ANKRD65E5RJM6 399 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 EMC8O43402 210 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 MAP7Q14244 749 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 CPZQ66K79 652 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 GALNT12Q8IXK2 581 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 OR56A1Q8NGH5 318 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 SPRY4Q9C004 299 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 PTGFRNQ9P2B2 879 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 ACSL6Q9UKU0 697 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 PADI2Q9Y2J8 665 aa25.68■■□□□ 1.7
CTDNEP1-201ENST00000318988 DMXL1Q9Y485 3027 aa25.67■■□□□ 1.7
CTDNEP1-201ENST00000318988 KNTC1P50748 2209 aa25.67■■□□□ 1.7
CTDNEP1-201ENST00000318988 IGKV3D-11A0A0A0MRZ8 115 aa25.67■■□□□ 1.7
CTDNEP1-201ENST00000318988 CFAP73A6NFT4 308 aa25.67■■□□□ 1.7
CTDNEP1-201ENST00000318988 STMND1H3BQB6 276 aa25.67■■□□□ 1.7
CTDNEP1-201ENST00000318988 RECKO95980 971 aa25.67■■□□□ 1.7
CTDNEP1-201ENST00000318988 CYC1P08574 325 aa25.67■■□□□ 1.7
CTDNEP1-201ENST00000318988 CD82P27701 267 aa25.67■■□□□ 1.7
CTDNEP1-201ENST00000318988 GALNSP34059 522 aa25.67■■□□□ 1.7
CTDNEP1-201ENST00000318988 PRKAG1P54619 331 aa25.67■■□□□ 1.7
CTDNEP1-201ENST00000318988 TP53BP2Q13625 1128 aa25.67■■□□□ 1.7
CTDNEP1-201ENST00000318988 TIPARPQ7Z3E1 657 aaKnown RBP25.67■■□□□ 1.7
CTDNEP1-201ENST00000318988 NLGN4XQ8N0W4 816 aa25.67■■□□□ 1.7
CTDNEP1-201ENST00000318988 NLGN4YQ8NFZ3 816 aaPredicted RBP25.67■■□□□ 1.7
CTDNEP1-201ENST00000318988 PNPT1Q8TCS8 783 aaKnown RBP25.67■■□□□ 1.7
CTDNEP1-201ENST00000318988 ZNF675Q8TD23 568 aa25.67■■□□□ 1.7
CTDNEP1-201ENST00000318988 FAM120BQ96EK7 910 aaKnown RBP25.67■■□□□ 1.7
CTDNEP1-201ENST00000318988 CMTM6Q9NX76 183 aa25.67■■□□□ 1.7
CTDNEP1-201ENST00000318988 ABCD2Q9UBJ2 740 aa25.67■■□□□ 1.7
CTDNEP1-201ENST00000318988 CLDN16Q9Y5I7 305 aa25.67■■□□□ 1.7
CTDNEP1-201ENST00000318988 CEP250Q9BV73 2442 aa25.67■■□□□ 1.7
CTDNEP1-201ENST00000318988 SCN2AQ99250 2005 aa25.66■■□□□ 1.7
CTDNEP1-201ENST00000318988 TCRBV16S1A1N1A0A5B0 115 aa25.66■■□□□ 1.7
CTDNEP1-201ENST00000318988 PLOD2O00469 737 aa25.66■■□□□ 1.7
CTDNEP1-201ENST00000318988 TCN2P20062 427 aa25.66■■□□□ 1.7
CTDNEP1-201ENST00000318988 MRPS35P82673 323 aaKnown RBP25.66■■□□□ 1.7
CTDNEP1-201ENST00000318988 PRICKLE4Q2TBC4 344 aa25.66■■□□□ 1.7
CTDNEP1-201ENST00000318988 ZNF628Q5EBL2 1059 aa25.66■■□□□ 1.7
CTDNEP1-201ENST00000318988 FAAH2Q6GMR7 532 aa25.66■■□□□ 1.7
CTDNEP1-201ENST00000318988 SPSB2Q99619 263 aa25.66■■□□□ 1.7
CTDNEP1-201ENST00000318988 TRIM4Q9C037 500 aa25.66■■□□□ 1.7
CTDNEP1-201ENST00000318988 CXorf21Q9HAI6 301 aa25.66■■□□□ 1.7
CTDNEP1-201ENST00000318988 PTRH2Q9Y3E5 179 aaKnown RBP25.66■■□□□ 1.7
CTDNEP1-201ENST00000318988 NEUROG3Q9Y4Z2 214 aa25.66■■□□□ 1.7
CTDNEP1-201ENST00000318988 CNOT1A5YKK6 2376 aaKnown RBP25.66■■□□□ 1.7
CTDNEP1-201ENST00000318988 NME4O00746 187 aa25.65■■□□□ 1.7
CTDNEP1-201ENST00000318988 DNAJA2O60884 412 aa25.65■■□□□ 1.7
CTDNEP1-201ENST00000318988 ALOX12BO75342 701 aa25.65■■□□□ 1.7
CTDNEP1-201ENST00000318988 NQO1P15559 274 aaKnown RBP25.65■■□□□ 1.7
CTDNEP1-201ENST00000318988 EEFSECP57772 596 aaKnown RBP25.65■■□□□ 1.7
CTDNEP1-201ENST00000318988 KCNJ2P63252 427 aa25.65■■□□□ 1.7
CTDNEP1-201ENST00000318988 VAC14Q08AM6 782 aa25.65■■□□□ 1.7
CTDNEP1-201ENST00000318988 SELPLGQ14242 412 aa25.65■■□□□ 1.7
CTDNEP1-201ENST00000318988 C6orf120Q7Z4R8 191 aa25.65■■□□□ 1.7
CTDNEP1-201ENST00000318988 VWA5B2Q8N398 1253 aa25.65■■□□□ 1.7
CTDNEP1-201ENST00000318988 FBXW8Q8N3Y1 598 aa25.65■■□□□ 1.7
CTDNEP1-201ENST00000318988 NUP43Q8NFH3 380 aa25.65■■□□□ 1.7
CTDNEP1-201ENST00000318988 NEURL3Q96EH8 262 aa25.65■■□□□ 1.7
CTDNEP1-201ENST00000318988 CLPTM1LQ96KA5 538 aa25.65■■□□□ 1.7
CTDNEP1-201ENST00000318988 ZNF578Q96N58 590 aaPredicted RBP25.65■■□□□ 1.7
CTDNEP1-201ENST00000318988 ADAP2Q9NPF8 381 aa25.65■■□□□ 1.7
CTDNEP1-201ENST00000318988 MAT2BQ9NZL9 334 aa25.65■■□□□ 1.7
CTDNEP1-201ENST00000318988 CLCA3PQ9Y6N3 262 aa25.65■■□□□ 1.7
CTDNEP1-201ENST00000318988 FER1L5A0AVI2 2057 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms