RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 OR7G3Q8NG95 312 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 OR11H7Q8NGC8 314 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 NEIL3Q8TAT5 605 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 BRI3BPQ8WY22 251 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 MRPS31Q92665 395 aaKnown RBP9.16□□□□□ -0.94
PTPRA-202ENST00000318266 OTULINQ96BN8 352 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 PPCDCQ96CD2 204 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 SORBS1Q9BX66 1292 aaKnown RBP9.16□□□□□ -0.94
PTPRA-202ENST00000318266 ARHGAP39Q9C0H5 1083 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 ABCG5Q9H222 651 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 BRD9Q9H8M2 597 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 RABL2AQ9UBK7 228 aaPredicted RBP9.16□□□□□ -0.94
PTPRA-202ENST00000318266 EXTL2Q9UBQ6 330 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 ANGPT4Q9Y264 503 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 SLC9A8Q9Y2E8 581 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 CDH10Q9Y6N8 788 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 CKAP5Q14008 2032 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 ANKDD1BA6NHY2 528 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 H3BUI4 141 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 HRO43593 1189 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 SLC43A1O75387 559 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 NME6O75414 186 aaPredicted RBP9.16□□□□□ -0.94
PTPRA-202ENST00000318266 LGI1O95970 557 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 TP53P04637 393 aaPredicted RBP9.16□□□□□ -0.94
PTPRA-202ENST00000318266 ZNF8P17098 575 aaPredicted RBP9.16□□□□□ -0.94
PTPRA-202ENST00000318266 RPL17P18621 184 aaKnown RBP9.16□□□□□ -0.94
PTPRA-202ENST00000318266 ELAVL4P26378 380 aaKnown RBP9.16□□□□□ -0.94
PTPRA-202ENST00000318266 ASMTP46597 345 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 BDKRB1P46663 353 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 PREPP48147 710 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 TAS2R50P59544 299 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 SNRPGP62308 76 aaKnown RBP9.16□□□□□ -0.94
PTPRA-202ENST00000318266 IRF5Q13568 498 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 GPR176Q14439 515 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 SUZ12Q15022 739 aaKnown RBP9.16□□□□□ -0.94
PTPRA-202ENST00000318266 MPEG1Q2M385 716 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 PLK5Q496M5 336 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 IDNKQ5T6J7 187 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 TECPR1Q7Z6L1 1165 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 APCDD1Q8J025 514 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 SLC7A13Q8TCU3 470 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 CD99L2Q8TCZ2 262 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 UFD1Q92890 307 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 RSPO3Q9BXY4 272 aaPredicted RBP9.16□□□□□ -0.94
PTPRA-202ENST00000318266 FZD3Q9NPG1 666 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 SPATA6Q9NWH7 488 aaPredicted RBP9.16□□□□□ -0.94
PTPRA-202ENST00000318266 C5AR2Q9P296 337 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 KCNE2Q9Y6J6 123 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 CHD5Q8TDI0 1954 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 SEC14L5O43304 696 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 ZNF623O75123 536 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 ADAP00813 363 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 IFNA14P01570 189 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 OR56A5P0C7T3 313 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 TIA1P31483 386 aaKnown RBP eCLIP9.16□□□□□ -0.94
PTPRA-202ENST00000318266 EVX1P49640 407 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 HMGA2P52926 109 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 MAP4K2Q12851 820 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 ZMYND11Q15326 602 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 SF3A2Q15428 464 aaKnown RBP9.16□□□□□ -0.94
PTPRA-202ENST00000318266 PRSS53Q2L4Q9 553 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 ZNF791Q3KP31 576 aaPredicted RBP9.16□□□□□ -0.94
PTPRA-202ENST00000318266 MTFR2Q6P444 385 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 HOMEZQ8IX15 550 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 ESX1Q8N693 406 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 WDR48Q8TAF3 677 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 PXYLP1Q8TE99 480 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 OR4K3Q96R72 315 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 ATF6BQ99941 703 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 SAP130Q9H0E3 1048 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 RC3H2Q9HBD1 1191 aaKnown RBP9.16□□□□□ -0.94
PTPRA-202ENST00000318266 FBXO9Q9UK97 447 aaPredicted RBP9.16□□□□□ -0.94
PTPRA-202ENST00000318266 CLCA2Q9UQC9 943 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 RWDD3Q9Y3V2 267 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 MYO10Q9HD67 2058 aa9.16□□□□□ -0.94
PTPRA-202ENST00000318266 TRBV5-4A0A0C4DH59 114 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 PIPSLA2A3N6 862 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 SLC38A8A6NNN8 435 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 M0R3H8 397 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 RNASET2O00584 256 aaKnown RBP9.15□□□□□ -0.94
PTPRA-202ENST00000318266 H1F0P07305 194 aaKnown RBP9.15□□□□□ -0.94
PTPRA-202ENST00000318266 C8GP07360 202 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 ELK1P19419 428 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 PBLDP30039 288 aaPredicted RBP9.15□□□□□ -0.94
PTPRA-202ENST00000318266 HNMTP50135 292 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 DCDC1P59894 354 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 WDR5P61964 334 aaKnown RBP9.15□□□□□ -0.94
PTPRA-202ENST00000318266 DSC1Q08554 894 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 BTN1A1Q13410 526 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 ILKQ13418 452 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 EXOSC2Q13868 293 aaKnown RBP9.15□□□□□ -0.94
PTPRA-202ENST00000318266 MRPL58Q14197 206 aaKnown RBP9.15□□□□□ -0.94
PTPRA-202ENST00000318266 TCTN3Q6NUS6 607 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 METTL2BQ6P1Q9 378 aaKnown RBP9.15□□□□□ -0.94
PTPRA-202ENST00000318266 PGBD2Q6P3X8 592 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 PRSS55Q6UWB4 352 aaPredicted RBP9.15□□□□□ -0.94
PTPRA-202ENST00000318266 COMMD6Q7Z4G1 85 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 OXR1Q8N573 874 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 GALNT6Q8NCL4 622 aa9.15□□□□□ -0.94
PTPRA-202ENST00000318266 OR4D11Q8NGI4 311 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms