RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 C17orf105B2RV13 164 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 FXYD1O00168 92 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 UMODP07911 640 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 PCSK2P16519 638 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 TCN1P20061 433 aaPredicted RBP14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 OTX2P32243 289 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 MSX2P35548 267 aaPredicted RBP14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 CHI3L1P36222 383 aaPredicted RBP14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 STAT5AP42229 794 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 ZNF267Q14586 743 aaPredicted RBP14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 TRMT5Q32P41 509 aaKnown RBP14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 MSRB3Q8IXL7 192 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 CACTIN-AS1Q8N1I8 211 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 ZNF321PQ8N8H1 164 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 OR7G2Q8NG99 324 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 METTL21AQ8WXB1 218 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 SLC7A6OSQ96CW6 309 aaPredicted RBP14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 CLPTM1LQ96KA5 538 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 CCDC115Q96NT0 180 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 OR8D2Q9GZM6 311 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 TGIF2Q9GZN2 237 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 SIRT3Q9NTG7 399 aaPredicted RBP14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 ZCCHC3Q9NUD5 404 aaKnown RBP14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 C14orf105Q9NVL8 296 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 TAS2R1Q9NYW7 299 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 IL17BQ9UHF5 180 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 VSTM2BA6NLU5 285 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 GYG2O15488 501 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 SEC24DO94855 1032 aaPredicted RBP14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 SORBS2O94875 1100 aaKnown RBP14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 SSTR4P31391 388 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 FOLR3P41439 243 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 GALNT12Q8IXK2 581 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 ST13P4Q8IZP2 240 aaPredicted RBP14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 C10orf111Q8N326 155 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 FAM156AQ8NDB6 213 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 ZFP28Q8NHY6 868 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 JADE3Q92613 823 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 NKD1Q969G9 470 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 FKBP10Q96AY3 582 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 THUMPD3Q9BV44 507 aaKnown RBP14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 CLK4Q9HAZ1 481 aaKnown RBP14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 ADAP2Q9NPF8 381 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 DDX18Q9NVP1 670 aaKnown RBP14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 ADA2Q9NZK5 511 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 TCFL5Q9UL49 500 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 VPS4AQ9UN37 437 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 ERVK-19Q9WJR5 959 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 NEUROG3Q9Y4Z2 214 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 CLCA3PQ9Y6N3 262 aa14.4□□□□□ -0.1
PDLIM5-202ENST00000318007 IGKV3D-11A0A0A0MRZ8 115 aa14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 TBX19O60806 448 aa14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 ALBP02768 609 aa14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 KRT16P08779 473 aa14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 SLC35E2P0CK97 266 aa14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 PTPN6P29350 595 aa14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 FRKP42685 505 aaPredicted RBP14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 SLC7A2P52569 658 aa14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 OR4D2P58180 307 aa14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 NCALDP61601 193 aa14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 RPS15P62841 145 aaKnown RBP14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 DNASE1L3Q13609 305 aa14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 NNATQ16517 81 aa14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 PRICKLE4Q2TBC4 344 aa14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 SFT2D3Q587I9 215 aa14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 IFNEQ86WN2 208 aa14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 OR5P2Q8WZ92 322 aa14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 NXPE2Q96DL1 559 aa14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 FAM120BQ96EK7 910 aaKnown RBP14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 CGREF1Q99674 301 aa14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 TRIM4Q9C037 500 aa14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 NRSN2Q9GZP1 204 aa14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 BCAP29Q9UHQ4 241 aa14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 BTNL2Q9UIR0 455 aa14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 USP22Q9UPT9 525 aa14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 MMACHCQ9Y4U1 282 aa14.39□□□□□ -0.11
PDLIM5-202ENST00000318007 TCRBV16S1A1N1A0A5B0 115 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 DYTNA2CJ06 578 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 PDE5AO76074 875 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 ATP1B1P05026 303 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 DDX5P17844 614 aaKnown RBP14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 SOX18P35713 384 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 CPOXP36551 454 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 STT3AP46977 705 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 CCT3P49368 545 aaKnown RBP14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 CEBPEQ15744 281 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 NANOGP8Q6NSW7 305 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 ANKRD37Q7Z713 158 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 VWA5B2Q8N398 1253 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 OR2Y1Q8NGV0 311 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 TSPEARQ8WU66 669 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 SLC26A1Q9H2B4 701 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 NANOGQ9H9S0 305 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 NEUROD4Q9HD90 331 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 ACSS1Q9NUB1 689 aaPredicted RBP14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 MAT2BQ9NZL9 334 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 FARSAQ9Y285 508 aaKnown RBP14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 PCDHGA7Q9Y5G6 932 aa14.38□□□□□ -0.11
PDLIM5-202ENST00000318007 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms