RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 FRKP42685 505 aaPredicted RBP18.09■□□□□ 0.49
RTN4-201ENST00000317610 HOXC5Q00444 222 aa18.09■□□□□ 0.49
RTN4-201ENST00000317610 QPRTQ15274 297 aa18.09■□□□□ 0.49
RTN4-201ENST00000317610 DUSP6Q16828 381 aa18.09■□□□□ 0.49
RTN4-201ENST00000317610 PYDC2Q56P42 97 aa18.09■□□□□ 0.49
RTN4-201ENST00000317610 TIGD3Q6B0B8 471 aa18.09■□□□□ 0.49
RTN4-201ENST00000317610 PODNL1Q6PEZ8 512 aa18.09■□□□□ 0.49
RTN4-201ENST00000317610 TMIGD1Q6UXZ0 262 aa18.09■□□□□ 0.49
RTN4-201ENST00000317610 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.09■□□□□ 0.495e-9■■■□□ 16.5
RTN4-201ENST00000317610 C6orf120Q7Z4R8 191 aa18.09■□□□□ 0.49
RTN4-201ENST00000317610 SETD7Q8WTS6 366 aaKnown RBP18.09■□□□□ 0.49
RTN4-201ENST00000317610 RAB8BQ92930 207 aa18.09■□□□□ 0.49
RTN4-201ENST00000317610 TRIM63Q969Q1 353 aa18.09■□□□□ 0.49
RTN4-201ENST00000317610 LRR1Q96L50 414 aa18.09■□□□□ 0.49
RTN4-201ENST00000317610 ZNF607Q96SK3 696 aa18.09■□□□□ 0.49
RTN4-201ENST00000317610 SMG9Q9H0W8 520 aaKnown RBP18.09■□□□□ 0.49
RTN4-201ENST00000317610 AHSPQ9NZD4 102 aa18.09■□□□□ 0.49
RTN4-201ENST00000317610 KLHL21Q9UJP4 597 aa18.09■□□□□ 0.49
RTN4-201ENST00000317610 TNFRSF10AO00220 468 aa18.08■□□□□ 0.48
RTN4-201ENST00000317610 PDPK1O15530 556 aa18.08■□□□□ 0.48
RTN4-201ENST00000317610 TRIM3O75382 744 aaPredicted RBP18.08■□□□□ 0.48
RTN4-201ENST00000317610 MMP12P39900 470 aa18.08■□□□□ 0.48
RTN4-201ENST00000317610 GIPRP48546 466 aa18.08■□□□□ 0.48
RTN4-201ENST00000317610 MANFP55145 182 aaKnown RBP18.08■□□□□ 0.48
RTN4-201ENST00000317610 PCBP4P57723 403 aaKnown RBP18.08■□□□□ 0.48
RTN4-201ENST00000317610 RPS25P62851 125 aaKnown RBP18.08■□□□□ 0.48
RTN4-201ENST00000317610 GINS1Q14691 196 aa18.08■□□□□ 0.48
RTN4-201ENST00000317610 LCN1P1Q5VSP4 162 aa18.08■□□□□ 0.48
RTN4-201ENST00000317610 ZER1Q7Z7L7 766 aa18.08■□□□□ 0.48
RTN4-201ENST00000317610 FAM129CQ86XR2 697 aa18.08■□□□□ 0.48
RTN4-201ENST00000317610 CFAP206Q8IYR0 622 aa18.08■□□□□ 0.48
RTN4-201ENST00000317610 NRSN1Q8IZ57 195 aa18.08■□□□□ 0.48
RTN4-201ENST00000317610 LINC00471Q8N535 108 aa18.08■□□□□ 0.48
RTN4-201ENST00000317610 TM9SF4Q92544 642 aa18.08■□□□□ 0.48
RTN4-201ENST00000317610 TMEM203Q969S6 136 aa18.08■□□□□ 0.48
RTN4-201ENST00000317610 TM4SF18Q96CE8 201 aa18.08■□□□□ 0.48
RTN4-201ENST00000317610 GON7Q9BXV9 100 aa18.08■□□□□ 0.48
RTN4-201ENST00000317610 IRGMA1A4Y4 181 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 PLPP1O14494 284 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 TBX6O95947 436 aaPredicted RBP18.07■□□□□ 0.48
RTN4-201ENST00000317610 CXCL10P02778 98 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 CTSLP07711 333 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 NR2F6P10588 404 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 MYL12AP19105 171 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 MMP11P24347 488 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 FGF9P31371 208 aaPredicted RBP18.07■□□□□ 0.48
RTN4-201ENST00000317610 GNG2P59768 71 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 CNTN1Q12860 1018 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 ACSM5Q6NUN0 579 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 CD200R1LQ6Q8B3 271 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 LIPIQ6XZB0 460 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 TBC1D19Q8N5T2 526 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 ENKURQ8TC29 256 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 SLC46A2Q9BY10 475 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 SEC14L3Q9UDX4 400 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 YARS2Q9Y2Z4 477 aaKnown RBP18.07■□□□□ 0.48
RTN4-201ENST00000317610 NOTOA8MTQ0 251 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 SLC30A4O14863 429 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 CSF2P04141 144 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 GJA1P17302 382 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 ERP29P30040 261 aaKnown RBP18.07■□□□□ 0.48
RTN4-201ENST00000317610 PPP3R1P63098 170 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 RAB40BQ12829 278 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 PIN1Q13526 163 aaPredicted RBP18.07■□□□□ 0.48
RTN4-201ENST00000317610 PEX5LQ8IYB4 626 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 ZFAND1Q8TCF1 268 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 MYLIPQ8WY64 445 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 SMPDL3AQ92484 453 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 SCLYQ96I15 445 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 SERHL2Q9H4I8 314 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 PPP1R3EQ9H7J1 279 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 MAN2C1Q9NTJ4 1040 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 WDR70Q9NW82 654 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 DKK3Q9UBP4 350 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 FBXW2Q9UKT8 454 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 NDRG2Q9UN36 371 aaKnown RBP18.07■□□□□ 0.48
RTN4-201ENST00000317610 CARD8Q9Y2G2 431 aa18.07■□□□□ 0.48
RTN4-201ENST00000317610 NEDD8-MDP1E9PL57 170 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 PROM1O43490 865 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 PI15O43692 258 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 ACP2P11117 423 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 MAP2K3P46734 347 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 CD83Q01151 205 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 GPR19Q15760 415 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 ZNF805Q5CZA5 627 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 ENTPD8Q5MY95 495 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 C1orf94Q6P1W5 598 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 METAP1DQ6UB28 335 aaPredicted RBP18.06■□□□□ 0.48
RTN4-201ENST00000317610 LCTLQ6UWM7 567 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 COMTD1Q86VU5 262 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 CAMKK1Q8N5S9 505 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 PLA2G15Q8NCC3 412 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 ATP6V1C2Q8NEY4 427 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 OR52P1PQ8NH57 321 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 JPH3Q8WXH2 748 aaPredicted RBP18.06■□□□□ 0.48
RTN4-201ENST00000317610 ZFYVE19Q96K21 471 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 ZNF558Q96NG5 402 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 TREX2Q9BQ50 279 aaPredicted RBP18.06■□□□□ 0.48
RTN4-201ENST00000317610 TRAF4Q9BUZ4 470 aaPredicted RBP18.06■□□□□ 0.48
RTN4-201ENST00000317610 A0A1W2PRU2 124 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms