RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 TP53INP1Q96A56 240 aa14.34□□□□□ -0.11
FOXR1-201ENST00000317011 SPACA9Q96E40 222 aaPredicted RBP14.34□□□□□ -0.11
FOXR1-201ENST00000317011 PHF21BQ96EK2 531 aa14.34□□□□□ -0.11
FOXR1-201ENST00000317011 CDK15Q96Q40 435 aa14.34□□□□□ -0.11
FOXR1-201ENST00000317011 FRG2BQ96QU4 278 aa14.34□□□□□ -0.11
FOXR1-201ENST00000317011 CXorf21Q9HAI6 301 aa14.34□□□□□ -0.11
FOXR1-201ENST00000317011 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.34□□□□□ -0.11
FOXR1-201ENST00000317011 COQ3Q9NZJ6 369 aa14.34□□□□□ -0.11
FOXR1-201ENST00000317011 CPSF2Q9P2I0 782 aaKnown RBP14.34□□□□□ -0.11
FOXR1-201ENST00000317011 RNF6Q9Y252 685 aa14.34□□□□□ -0.11
FOXR1-201ENST00000317011 CHCHD2Q9Y6H1 151 aaPredicted RBP14.34□□□□□ -0.11
FOXR1-201ENST00000317011 IQANK1A0A1B0GTG1 560 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 ANKRD33BA6NCL7 494 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 GLOD5A6NK44 160 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 TRIM49D1C9J1S8 452 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 NPIPA2E9PIF3 369 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 NPIPA3F8WFD2 350 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 G3V3Y1 287 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 AQP7O14520 342 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 BCKDKO14874 412 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 HCN1O60741 890 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 CDH16O75309 829 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 TOXO94900 526 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 AIFM1O95831 613 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 S1PR1P21453 382 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 CNTFP26441 200 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 SSTR2P30874 369 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 PIGAP37287 484 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 MAGEA5P43359 124 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 DNASE1L1P49184 302 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 HERVK_113P63132 956 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 ERVK-8P63133 956 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 PLGLB1Q02325 96 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 ZNF267Q14586 743 aaPredicted RBP14.33□□□□□ -0.12
FOXR1-201ENST00000317011 EBPQ15125 230 aaKnown RBP14.33□□□□□ -0.12
FOXR1-201ENST00000317011 TSNAXIP1Q2TAA8 658 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 RTL6Q6ICC9 239 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 CYP20A1Q6UW02 462 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 TIFABQ6ZNK6 161 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 FAM47EQ6ZV65 393 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 NUDT13Q86X67 352 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 TDRPQ86YL5 185 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 METTL4Q8N3J2 472 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 FBXW8Q8N3Y1 598 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 SLC22A8Q8TCC7 542 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 SREK1Q8WXA9 508 aaKnown RBP14.33□□□□□ -0.12
FOXR1-201ENST00000317011 RND1Q92730 232 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 NSUN5Q96P11 429 aaKnown RBP14.33□□□□□ -0.12
FOXR1-201ENST00000317011 MRPL57Q9BQC6 102 aaKnown RBP14.33□□□□□ -0.12
FOXR1-201ENST00000317011 ERVK-6Q9BXR3 956 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 ROPN1BQ9BZX4 212 aaPredicted RBP14.33□□□□□ -0.12
FOXR1-201ENST00000317011 WWTR1Q9GZV5 400 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 ROPN1Q9HAT0 212 aaPredicted RBP14.33□□□□□ -0.12
FOXR1-201ENST00000317011 ACKR4Q9NPB9 350 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 PNPLA3Q9NST1 481 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 CNIH4Q9P003 139 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 ZNF225Q9UK10 706 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 CES1P1Q9UKY3 287 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 CNOT11Q9UKZ1 510 aaKnown RBP14.33□□□□□ -0.12
FOXR1-201ENST00000317011 ERVK-19Q9WJR5 959 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 LIPGQ9Y5X9 500 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.33□□□□□ -0.12
FOXR1-201ENST00000317011 TACC2O95359 2948 aa14.33□□□□□ -0.12
FOXR1-201ENST00000317011 A0A1B0GTL3 188 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 A0A1W2PS29 197 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 PPP6CO00743 305 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 DYNC1I1O14576 645 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 RPS17P08708 135 aaKnown RBP14.32□□□□□ -0.12
FOXR1-201ENST00000317011 SNRPAP09012 282 aaKnown RBP14.32□□□□□ -0.12
FOXR1-201ENST00000317011 CELA3AP09093 270 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 NR2F6P10588 404 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 SERPINB3P29508 390 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 CHRNB4P30926 498 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 CCNG1P51959 295 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 NUP107P57740 925 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 PMPCAQ10713 525 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 NTRK2Q16620 822 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 LGSNQ5TDP6 509 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 ACAD11Q709F0 780 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 MILR1Q7Z6M3 343 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 LRRC25Q8N386 305 aaPredicted RBP14.32□□□□□ -0.12
FOXR1-201ENST00000317011 RIBC1Q8N443 379 aaPredicted RBP14.32□□□□□ -0.12
FOXR1-201ENST00000317011 ZNF615Q8N8J6 731 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 DOK4Q8TEW6 326 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 ATP6V1E2Q96A05 226 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 ADIPOR1Q96A54 375 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 SMC6Q96SB8 1091 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 TMEM109Q9BVC6 243 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 CENPHQ9H3R5 247 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 WDR41Q9HAD4 459 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 ZFP64Q9NPA5 681 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 ZNF446Q9NWS9 450 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 QPCTLQ9NXS2 382 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 XPR1Q9UBH6 696 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 PCDHGB3Q9Y5G1 929 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 FAM215AQ9Y5M1 114 aa14.32□□□□□ -0.12
FOXR1-201ENST00000317011 EML6Q6ZMW3 1958 aa14.31□□□□□ -0.12
FOXR1-201ENST00000317011 FOXO6A8MYZ6 492 aa14.31□□□□□ -0.12
FOXR1-201ENST00000317011 TRIM3O75382 744 aaPredicted RBP14.31□□□□□ -0.12
FOXR1-201ENST00000317011 GBAP04062 536 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms