RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 ZNF222Q9UK12 451 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 NDRG2Q9UN36 371 aaKnown RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 CLCA2Q9UQC9 943 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 CACNG2Q9Y698 323 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 FOXE1O00358 373 aaPredicted RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 ETFAP13804 333 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 DDCP20711 480 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 AVPR1BP47901 424 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 AP3S2P59780 193 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 RGMBQ6NW40 437 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 BHLHB9Q6PI77 547 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 GPAT4Q86UL3 456 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 SERINC5Q86VE9 423 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 CIR1Q86X95 450 aaPredicted RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 TBC1D19Q8N5T2 526 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 DBF4BQ8NFT6 615 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 OR2T35Q8NGX2 323 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 OR5P2Q8WZ92 322 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 MTERF1Q99551 399 aaKnown RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 THAP7Q9BT49 309 aaPredicted RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 BOCQ9BWV1 1114 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 ANKRD19PQ9H560 264 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 LDAHQ9H6V9 325 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 MIEF1Q9NQG6 463 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 PTGFRNQ9P2B2 879 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 TESQ9UGI8 421 aaKnown RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 CLEC2DQ9UHP7 191 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 TSR3Q9UJK0 312 aaKnown RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 SLC13A4Q9UKG4 626 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 ACAD8Q9UKU7 415 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 A0A1W2PPL8 197 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 ANKRD61A6NGH8 418 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 LRRTM2O43300 516 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 HRO43593 1189 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 CELF2O95319 508 aaKnown RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 SRCP12931 536 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 OR1E2P47887 323 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 KCNJ5P48544 419 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 PGFP49763 221 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 CRISP3P54108 245 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 MRPS10P82664 201 aaKnown RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 DSC1Q08554 894 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 CHRNA6Q15825 494 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 EID2Q8N6I1 236 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 ZNF557Q8N988 423 aaPredicted RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 LKAAEAR1Q8TD35 194 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 SCRN2Q96FV2 425 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 CMTM3Q96MX0 182 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 ATG10Q9H0Y0 220 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 DNTTIP1Q9H147 329 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 TTYH1Q9H313 450 aaPredicted RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 HCN3Q9P1Z3 774 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 SLC23A1Q9UHI7 598 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 ICKQ9UPZ9 632 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 DYRK1BQ9Y463 629 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 NPTNQ9Y639 398 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 IGLV3-16A0A075B6K0 115 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 TEX13CA0A0J9YWL9 993 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 PAHP00439 452 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 LCN1P31025 176 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 CDH11P55287 796 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 SLC5A12Q1EHB4 618 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 CXXC5Q7LFL8 322 aaKnown RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 THOC6Q86W42 341 aaKnown RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 UBE2J2Q8N2K1 259 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 C2orf69Q8N8R5 385 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 SLC7A13Q8TCU3 470 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 MAL2Q969L2 176 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 ZNF436Q9C0F3 470 aaPredicted RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 KLHL28Q9NXS3 571 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 PADI3Q9ULW8 664 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 MRPL42Q9Y6G3 142 aaKnown RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 LOC102723532A0A0G2JNH3 316 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 ARHGEF33A8MVX0 844 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 EOMESO95936 686 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 UGT2B7P16662 529 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 PITPNBP48739 271 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 GANABQ14697 944 aaKnown RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 AANATQ16613 207 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 SPRYD7Q5W111 196 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 TCTN3Q6NUS6 607 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 KIAA1324Q6UXG2 1013 aaKnown RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 RTL4Q6ZR62 310 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 HSD17B13Q7Z5P4 300 aaPredicted RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 KLHDC8AQ8IYD2 350 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 ANKRD53Q8N9V6 530 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 BBS10Q8TAM1 723 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 TMEM203Q969S6 136 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 COQ10AQ96MF6 247 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 PKP4Q99569 1192 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 INPP5EQ9NRR6 644 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 NUDT15Q9NV35 164 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 MARK1Q9P0L2 795 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 ZNF624Q9P2J8 865 aaPredicted RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 SEC14L3Q9UDX4 400 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 CYB5R1Q9UHQ9 305 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 ANKRD31Q8N7Z5 1873 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 HEPACAM2A8MVW5 462 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms