RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 SPIN1Q9Y657 262 aaPredicted RBP12.75□□□□□ -0.37
SKA3-202ENST00000314759 MYOFQ9NZM1 2061 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 C5orf58C9J3I9 102 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 HOXA2O43364 376 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 ATG13O75143 517 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 C1orf105O95561 183 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 URODP06132 367 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 ZNF30P17039 623 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 CPN2P22792 545 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 SLC9A3P48764 834 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 EPHB3P54753 998 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 CAV3P56539 151 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 NFE2L1Q14494 772 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 SYT14P1Q58G82 188 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 ASTLQ6HA08 431 aaPredicted RBP12.75□□□□□ -0.37
SKA3-202ENST00000314759 PLCZ1Q86YW0 608 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 FAM26EQ8N5C1 309 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 SYT14Q8NB59 555 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 OR4M2Q8NGB6 313 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 RAB8BQ92930 207 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 MTERF3Q96E29 417 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 WDR34Q96EX3 536 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 KATNB1Q9BVA0 655 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 MVB12BQ9H7P6 319 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 SLAMF7Q9NQ25 335 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 MIEF1Q9NQG6 463 aa12.75□□□□□ -0.37
SKA3-202ENST00000314759 TESQ9UGI8 421 aaKnown RBP12.75□□□□□ -0.37
SKA3-202ENST00000314759 ANKDD1BA6NHY2 528 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 TSC22D2O75157 780 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 DCDC1P59894 354 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 ZNF628Q5EBL2 1059 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 PLET1Q6UQ28 207 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 IQCF2Q8IXL9 164 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 TRAM1L1Q8N609 369 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.74□□□□□ -0.37
SKA3-202ENST00000314759 TM9SF4Q92544 642 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 CCDC120Q96HB5 630 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 KCTD7Q96MP8 289 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 FOPNLQ96NB1 174 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 FUZQ9BT04 418 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 EFCAB11Q9BUY7 163 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 COQ3Q9NZJ6 369 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 KLHL21Q9UJP4 597 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 TEX28O15482 410 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 RAB36O95755 333 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 C1QBP02746 253 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 VIPR1P32241 457 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 PRLHRP49683 370 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 RPS25P62851 125 aaKnown RBP12.74□□□□□ -0.37
SKA3-202ENST00000314759 ESCO2Q56NI9 601 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 OR2G6Q5TZ20 316 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 GAREM2Q75VX8 874 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 DDX53Q86TM3 631 aaKnown RBP12.74□□□□□ -0.37
SKA3-202ENST00000314759 PDZD3Q86UT5 571 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 OR2A12Q8NGT7 310 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 TIFAQ96CG3 184 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 C1GALT1C1Q96EU7 318 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 ZBED6CLQ96FA7 236 aaPredicted RBP12.74□□□□□ -0.37
SKA3-202ENST00000314759 LRR1Q96L50 414 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 GFM1Q96RP9 751 aaKnown RBP12.74□□□□□ -0.37
SKA3-202ENST00000314759 TM9SF2Q99805 663 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 A4GALTQ9NPC4 353 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 SEMA3GQ9NS98 782 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 MCUBQ9NWR8 336 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 NLKQ9UBE8 527 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 ICKQ9UPZ9 632 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 INSL5Q9Y5Q6 135 aa12.74□□□□□ -0.37
SKA3-202ENST00000314759 A0A1W2PQ45 241 aaPredicted RBP12.73□□□□□ -0.37
SKA3-202ENST00000314759 A0A1W2PQY0 241 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 QSOX1O00391 747 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 NRG2O14511 850 aaPredicted RBP12.73□□□□□ -0.37
SKA3-202ENST00000314759 APOL3O95236 402 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 LSM11P83369 360 aaKnown RBP eCLIP12.73□□□□□ -0.37
SKA3-202ENST00000314759 TMEM115Q12893 351 aaPredicted RBP12.73□□□□□ -0.37
SKA3-202ENST00000314759 PIN1Q13526 163 aaPredicted RBP12.73□□□□□ -0.37
SKA3-202ENST00000314759 UAP1L1Q3KQV9 507 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 TMEM220Q6QAJ8 160 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 LAPTM4BQ86VI4 370 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 SLC43A3Q8NBI5 491 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 OR52P1PQ8NH57 321 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 NEURL3Q96EH8 262 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 ZSCAN5AQ9BUG6 496 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 POLDIP3Q9BY77 421 aaKnown RBP12.73□□□□□ -0.37
SKA3-202ENST00000314759 STARD7Q9NQZ5 370 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 SF3B6Q9Y3B4 125 aaKnown RBP12.73□□□□□ -0.37
SKA3-202ENST00000314759 DYRK1BQ9Y463 629 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 LAMA2P24043 3122 aaKnown RBP12.73□□□□□ -0.37
SKA3-202ENST00000314759 THSD7BQ9C0I4 1608 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 PDE4DIPQ5VU43 2346 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 B4GALT2O60909 372 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 GABRR2P28476 465 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 EVI2BP34910 448 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 GAS1P54826 345 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 RAB25P57735 213 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 ALDH6A1Q02252 535 aaKnown RBP12.73□□□□□ -0.37
SKA3-202ENST00000314759 PLK5Q496M5 336 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 TOR2AQ5JU69 321 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 HIST2H2AA3Q6FI13 130 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 ACSM5Q6NUN0 579 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 ZNF730Q6ZMV8 503 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms