RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 SYT17Q9BSW7 474 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 IKZF2Q9UKS7 526 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 NEMP2A6NFY4 417 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 M0R129 80 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 OR1F1O43749 312 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 CPOXP36551 454 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 MAP2K6P52564 334 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 MINDY4Q4G0A6 757 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 CXorf57Q6NSI4 855 aaKnown RBP8.43□□□□□ -1.06
COL6A5-202ENST00000312481 TMEM53Q6P2H8 277 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 CNKSR3Q6P9H4 555 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 KIAA1324Q6UXG2 1013 aaKnown RBP8.43□□□□□ -1.06
COL6A5-202ENST00000312481 NKAIN3Q8N8D7 197 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 SPATA22Q8NHS9 363 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 ZNF384Q8TF68 577 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 SCRN2Q96FV2 425 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 ZNF486Q96H40 463 aaPredicted RBP8.43□□□□□ -1.06
COL6A5-202ENST00000312481 RNF121Q9H920 327 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 TBC1D17Q9HA65 648 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 TGM4P49221 684 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 CHRDL2Q6WN34 429 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 LRRC25Q8N386 305 aaPredicted RBP8.43□□□□□ -1.06
COL6A5-202ENST00000312481 SLAMF9Q96A28 289 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 ASB6Q9NWX5 421 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 CFAP97Q9P2B7 532 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 TESQ9UGI8 421 aaKnown RBP8.43□□□□□ -1.06
COL6A5-202ENST00000312481 WDR45Q9Y484 360 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 AHCTF1Q8WYP5 2266 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 LINC00854A0A1B0GVQ3 168 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 GABARAPO95166 117 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 CYP17A1P05093 508 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 C1GALT1C1LP0DN25 315 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 T-ENOLP0DO92 83 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 CD52P31358 61 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 MAXP61244 160 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 ERVK-21P61565 698 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 TSPAN5P62079 268 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 NKX3-2P78367 333 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 SNTB2Q13425 540 aaKnown RBP8.43□□□□□ -1.06
COL6A5-202ENST00000312481 TSTQ16762 297 aaKnown RBP8.43□□□□□ -1.06
COL6A5-202ENST00000312481 YOD1Q5VVQ6 348 aaPredicted RBP8.43□□□□□ -1.06
COL6A5-202ENST00000312481 AMIGO1Q86WK6 493 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 UXS1Q8NBZ7 420 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 SRMSQ9H3Y6 488 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 DPEP3Q9H4B8 488 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 DNAJC15Q9Y5T4 150 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 KDM4BO94953 1096 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 UBL3O95164 117 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 RAF1P04049 648 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 IL32P24001 234 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 HOXC12P31275 282 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 GLP1RP43220 463 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 ETV1P50549 477 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 ILKQ13418 452 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 APOFQ13790 326 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 MPP2Q14168 576 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 ZNF792Q3KQV3 632 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 UNC50Q53HI1 259 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 SPANXN4Q5MJ08 99 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 CMIPQ8IY22 773 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 CPXM2Q8N436 756 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 ZNF454Q8N9F8 522 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 SIDT2Q8NBJ9 832 aaKnown RBP8.43□□□□□ -1.06
COL6A5-202ENST00000312481 WDR48Q8TAF3 677 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 MSANTD3Q96H12 275 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 PRELID3BQ9Y3B1 194 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 TIMM22Q9Y584 194 aa8.43□□□□□ -1.06
COL6A5-202ENST00000312481 ISM1B1AKI9 464 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 CLDN5O00501 218 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 SEC14L5O43304 696 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 HAPLN1P10915 354 aaPredicted RBP8.42□□□□□ -1.06
COL6A5-202ENST00000312481 CCKBRP32239 447 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 RGS6P49758 472 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 AFF1P51825 1210 aaKnown RBP8.42□□□□□ -1.06
COL6A5-202ENST00000312481 HAGHLQ6PII5 290 aaPredicted RBP8.42□□□□□ -1.06
COL6A5-202ENST00000312481 SLC35B4Q969S0 331 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 GTPBP3Q969Y2 492 aaKnown RBP8.42□□□□□ -1.06
COL6A5-202ENST00000312481 GIMAP5Q96F15 307 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 SH3YL1Q96HL8 342 aaPredicted RBP8.42□□□□□ -1.06
COL6A5-202ENST00000312481 NELL2Q99435 816 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 MTERF1Q99551 399 aaKnown RBP8.42□□□□□ -1.06
COL6A5-202ENST00000312481 CDCA3Q99618 268 aaPredicted RBP8.42□□□□□ -1.06
COL6A5-202ENST00000312481 KXD1Q9BQD3 176 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 ACTRT3Q9BYD9 372 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 ABCG5Q9H222 651 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 PTGES2Q9H7Z7 377 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 IL37Q9NZH6 218 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 ATG4BQ9Y4P1 393 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 PCDHA9Q9Y5H5 950 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 CPQQ9Y646 472 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 MGAMO43451 1857 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 ZCWPW2A0A1B0GU75 182 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 SCG5P05408 212 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 ATF4P18848 351 aaPredicted RBP8.42□□□□□ -1.06
COL6A5-202ENST00000312481 LHCGRP22888 699 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 EPHA5P54756 1037 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 UFM1P61960 85 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 RBM39Q14498 530 aaKnown RBP8.42□□□□□ -1.06
COL6A5-202ENST00000312481 SMAD1Q15797 465 aaKnown RBP8.42□□□□□ -1.06
COL6A5-202ENST00000312481 GRIK5Q16478 980 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms