RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 SDK1Q7Z5N4 2213 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 PRAMEF27A3QJZ7 478 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 POM121BA6NF01 834 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 DPM1O60762 260 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 RNGTTO60942 597 aaKnown RBP10.92□□□□□ -0.66
PTPN2-201ENST00000309660 CEACAM5P06731 702 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 ELAVL4P26378 380 aaKnown RBP10.92□□□□□ -0.66
PTPN2-201ENST00000309660 RNF144AP50876 292 aaPredicted RBP10.92□□□□□ -0.66
PTPN2-201ENST00000309660 XKP51811 444 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 HOXC5Q00444 222 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 TBCEQ15813 527 aaPredicted RBP10.92□□□□□ -0.66
PTPN2-201ENST00000309660 TJAP1Q5JTD0 557 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 ZNF776Q68DI1 518 aaPredicted RBP10.92□□□□□ -0.66
PTPN2-201ENST00000309660 TRIM73Q86UV7 250 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 OR10G6Q8NH81 332 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 LCN9Q8WX39 176 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 AICDAQ9GZX7 198 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 RSPH9Q9H1X1 276 aaPredicted RBP10.92□□□□□ -0.66
PTPN2-201ENST00000309660 SLC13A4Q9UKG4 626 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 A0A1W2PR48 441 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 CACNB4O00305 520 aaPredicted RBP10.92□□□□□ -0.66
PTPN2-201ENST00000309660 RPLP0P05388 317 aaKnown RBP10.92□□□□□ -0.66
PTPN2-201ENST00000309660 PCBP4P57723 403 aaKnown RBP10.92□□□□□ -0.66
PTPN2-201ENST00000309660 ERVK-21P61565 698 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 RPS21P63220 83 aaKnown RBP10.92□□□□□ -0.66
PTPN2-201ENST00000309660 BTN3A2P78410 334 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 ALDH6A1Q02252 535 aaKnown RBP10.92□□□□□ -0.66
PTPN2-201ENST00000309660 CARTPTQ16568 116 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 ITPRIPL2Q3MIP1 535 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 UBE2UQ5VVX9 321 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 ENPP7Q6UWV6 458 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 USP34Q70CQ2 3546 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 IQCHQ86VS3 1027 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 COMTD1Q86VU5 262 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 KCT2Q8NC54 265 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 OR6Q1Q8NGQ2 317 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 FCGR1BQ92637 280 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 MAPKAP1Q9BPZ7 522 aa10.92□□□□□ -0.66
PTPN2-201ENST00000309660 AGRPO00253 132 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 BTN3A3O00478 584 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 KPNA4O00629 521 aaPredicted RBP10.91□□□□□ -0.66
PTPN2-201ENST00000309660 TBX1O43435 398 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 ASGR2P07307 311 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 DDX5P17844 614 aaKnown RBP10.91□□□□□ -0.66
PTPN2-201ENST00000309660 CDH3P22223 829 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 ACVR2AP27037 513 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 IGFALSP35858 605 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 IFITM3Q01628 133 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 MLLT1Q03111 559 aaPredicted RBP10.91□□□□□ -0.66
PTPN2-201ENST00000309660 DUSP2Q05923 314 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 OR4N5Q8IXE1 308 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 TP53I13Q8NBR0 393 aaPredicted RBP10.91□□□□□ -0.66
PTPN2-201ENST00000309660 CCL4L1Q8NHW4 92 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 S100ZQ8WXG8 99 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 TSACCQ96A04 125 aaPredicted RBP10.91□□□□□ -0.66
PTPN2-201ENST00000309660 ZNF354BQ96LW1 612 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 MGLLQ99685 303 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 SLIRPQ9GZT3 109 aaKnown RBP10.91□□□□□ -0.66
PTPN2-201ENST00000309660 DSN1Q9H410 356 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 SLC6A20Q9NP91 592 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 A4GALTQ9NPC4 353 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 CD93Q9NPY3 652 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 AKIP1Q9NQ31 210 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 KCNE3Q9Y6H6 103 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 SCN2AQ99250 2005 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 TLX2O43763 284 aaPredicted RBP10.91□□□□□ -0.66
PTPN2-201ENST00000309660 NTN1O95631 604 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 ADH1BP00325 375 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 ERGP11308 486 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 HIST1H1TP22492 207 aaPredicted RBP10.91□□□□□ -0.66
PTPN2-201ENST00000309660 MC3RP41968 323 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 SLC13A2Q13183 592 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 LTB4RQ15722 352 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 ZNF404Q494X3 552 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 FAM46DQ8NEK8 389 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 OR6T1Q8NGN1 323 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 OR9A2Q8NGT5 310 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 CHPT1Q8WUD6 406 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 HTRA1Q92743 480 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 CNRIP1Q96F85 164 aaPredicted RBP10.91□□□□□ -0.66
PTPN2-201ENST00000309660 TPK1Q9H3S4 243 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 CAPN10Q9HC96 672 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 IFT52Q9Y366 437 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 AP1M2Q9Y6Q5 423 aa10.91□□□□□ -0.66
PTPN2-201ENST00000309660 SNRNP200O75643 2136 aaKnown RBP10.91□□□□□ -0.66
PTPN2-201ENST00000309660 ZNF860A6NHJ4 632 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 CLEC3AO75596 197 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 SULT1C4O75897 302 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 AIFM1O95831 613 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 EML2O95834 649 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 EIF2S1P05198 315 aaKnown RBP10.9□□□□□ -0.66
PTPN2-201ENST00000309660 ADRA2AP08913 450 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 SOX3P41225 446 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 AVPR1BP47901 424 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 KCNJ5P48544 419 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 RGS6P49758 472 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 PPP2CBP62714 309 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 PPP2CAP67775 309 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 ID2Q02363 134 aa10.9□□□□□ -0.66
PTPN2-201ENST00000309660 SDE2Q6IQ49 451 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms