RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 JSRP1Q96MG2 331 aaPredicted RBP17.99■□□□□ 0.47
LIME1-201ENST00000309546 HBEGFQ99075 208 aa17.99■□□□□ 0.47
LIME1-201ENST00000309546 CXorf21Q9HAI6 301 aa17.99■□□□□ 0.47
LIME1-201ENST00000309546 ADAM29Q9UKF5 820 aa17.99■□□□□ 0.47
LIME1-201ENST00000309546 BOKQ9UMX3 212 aaPredicted RBP17.99■□□□□ 0.47
LIME1-201ENST00000309546 SNX6Q9UNH7 406 aa17.99■□□□□ 0.47
LIME1-201ENST00000309546 RNF6Q9Y252 685 aa17.99■□□□□ 0.47
LIME1-201ENST00000309546 NINQ8N4C6 2090 aa17.99■□□□□ 0.47
LIME1-201ENST00000309546 C2orf92A0A1B0GVN3 265 aa17.98■□□□□ 0.47
LIME1-201ENST00000309546 KIF2AO00139 706 aaPredicted RBP17.98■□□□□ 0.47
LIME1-201ENST00000309546 BCKDKO14874 412 aa17.98■□□□□ 0.47
LIME1-201ENST00000309546 OR4F21O95013 312 aa17.98■□□□□ 0.47
LIME1-201ENST00000309546 IGHG3P01860 377 aa17.98■□□□□ 0.47
LIME1-201ENST00000309546 ABHD2P08910 425 aa17.98■□□□□ 0.47
LIME1-201ENST00000309546 FBXO45P0C2W1 286 aa17.98■□□□□ 0.47
LIME1-201ENST00000309546 CT62P0C5K7 136 aa17.98■□□□□ 0.47
LIME1-201ENST00000309546 TAC1P20366 129 aa17.98■□□□□ 0.47
LIME1-201ENST00000309546 GALNSP34059 522 aa17.98■□□□□ 0.47
LIME1-201ENST00000309546 MAN2A2P49641 1150 aa17.98■□□□□ 0.47
LIME1-201ENST00000309546 GXYLT1Q4G148 440 aa17.98■□□□□ 0.47
LIME1-201ENST00000309546 ADGRD1Q6QNK2 874 aa17.98■□□□□ 0.47
LIME1-201ENST00000309546 TMEM64Q6YI46 380 aa17.98■□□□□ 0.47
LIME1-201ENST00000309546 DND1Q8IYX4 353 aaKnown RBP17.98■□□□□ 0.47
LIME1-201ENST00000309546 TAGAPQ8N103 731 aa17.98■□□□□ 0.47
LIME1-201ENST00000309546 METTL4Q8N3J2 472 aa17.98■□□□□ 0.47
LIME1-201ENST00000309546 FBXW8Q8N3Y1 598 aa17.98■□□□□ 0.47
LIME1-201ENST00000309546 KIF18AQ8NI77 898 aa17.98■□□□□ 0.47
LIME1-201ENST00000309546 ASB5Q8WWX0 329 aa17.98■□□□□ 0.47
LIME1-201ENST00000309546 RND1Q92730 232 aa17.98■□□□□ 0.47
LIME1-201ENST00000309546 SH2D2AQ9NP31 389 aa17.98■□□□□ 0.47
LIME1-201ENST00000309546 TRPS1Q9UHF7 1281 aa17.98■□□□□ 0.47
LIME1-201ENST00000309546 ABCA12Q86UK0 2595 aa17.97■□□□□ 0.47
LIME1-201ENST00000309546 EXPH5Q8NEV8 1989 aa17.97■□□□□ 0.47
LIME1-201ENST00000309546 OR14I1A6ND48 311 aa17.97■□□□□ 0.47
LIME1-201ENST00000309546 SUPT7LO94864 414 aa17.97■□□□□ 0.47
LIME1-201ENST00000309546 GCAP28676 217 aa17.97■□□□□ 0.47
LIME1-201ENST00000309546 CHRNB4P30926 498 aa17.97■□□□□ 0.47
LIME1-201ENST00000309546 XKP51811 444 aa17.97■□□□□ 0.47
LIME1-201ENST00000309546 NUP107P57740 925 aa17.97■□□□□ 0.47
LIME1-201ENST00000309546 PMPCAQ10713 525 aa17.97■□□□□ 0.47
LIME1-201ENST00000309546 SLC10A1Q14973 349 aa17.97■□□□□ 0.47
LIME1-201ENST00000309546 HYAL4Q2M3T9 481 aa17.97■□□□□ 0.47
LIME1-201ENST00000309546 CCDC71Q8IV32 467 aaPredicted RBP17.97■□□□□ 0.47
LIME1-201ENST00000309546 IFT20Q8IY31 132 aa17.97■□□□□ 0.47
LIME1-201ENST00000309546 CEP112Q8N8E3 955 aa17.97■□□□□ 0.47
LIME1-201ENST00000309546 MTBPQ96DY7 904 aa17.97■□□□□ 0.47
LIME1-201ENST00000309546 OR10A5Q9H207 317 aa17.97■□□□□ 0.47
LIME1-201ENST00000309546 ZNF703Q9H7S9 590 aaPredicted RBP17.97■□□□□ 0.47
LIME1-201ENST00000309546 CNIH4Q9P003 139 aa17.97■□□□□ 0.47
LIME1-201ENST00000309546 TMEM216Q9P0N5 145 aa17.97■□□□□ 0.47
LIME1-201ENST00000309546 ACAD8Q9UKU7 415 aa17.97■□□□□ 0.47
LIME1-201ENST00000309546 CHCHD2Q9Y6H1 151 aaPredicted RBP17.97■□□□□ 0.47
LIME1-201ENST00000309546 LRBAP50851 2863 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 TRGV5A0A0B4J1U4 118 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 NKX2-6A6NCS4 301 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 FIGNL2A6NMB9 653 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 AQP7O14520 342 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 RIPK2O43353 540 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 GUCY1B2O75343 617 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 ERAL1O75616 437 aaKnown RBP17.96■□□□□ 0.47
LIME1-201ENST00000309546 RHOXF2BP0C7M4 288 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 RFPL3SP0C7P2 107 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 CPMP14384 443 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 DEKP35659 375 aaKnown RBP17.96■□□□□ 0.47
LIME1-201ENST00000309546 CLCQ05315 142 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 GALNT1Q10472 559 aaPredicted RBP17.96■□□□□ 0.47
LIME1-201ENST00000309546 TBL3Q12788 808 aaKnown RBP17.96■□□□□ 0.47
LIME1-201ENST00000309546 TCHHL1Q5QJ38 904 aaPredicted RBP17.96■□□□□ 0.47
LIME1-201ENST00000309546 MEX3BQ6ZN04 569 aaKnown RBP17.96■□□□□ 0.47
LIME1-201ENST00000309546 ACAD11Q709F0 780 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 TRMT10CQ7L0Y3 403 aaKnown RBP17.96■□□□□ 0.47
LIME1-201ENST00000309546 ZNF295-AS1Q8N0V1 137 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 MMP21Q8N119 569 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 TMEM151AQ8N4L1 468 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 CDYL2Q8N8U2 506 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 ZNF441Q8N8Z8 693 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 OR10Q1Q8NGQ4 319 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 DIO2Q92813 273 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 SARAFQ96BY9 339 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 RHOXF2Q9BQY4 288 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 DOHHQ9BU89 302 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 C1QTNF3Q9BXJ4 246 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 BRINP2Q9C0B6 783 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 BRF2Q9HAW0 419 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 ZFP64Q9NPA5 681 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 ALKBH4Q9NXW9 302 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 CNOT11Q9UKZ1 510 aaKnown RBP17.96■□□□□ 0.47
LIME1-201ENST00000309546 PCDHA9Q9Y5H5 950 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 HCFC1P51610 2035 aa17.96■□□□□ 0.47
LIME1-201ENST00000309546 CSMD1Q96PZ7 3565 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 A0A1B0GVC2 190 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 C1orf226A1L170 272 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 GOLGA6L10A6NI86 522 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 LRRC3CA6NJW4 275 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 GOLGA8RI6L899 631 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 PORP16435 677 aaPredicted RBP17.95■□□□□ 0.46
LIME1-201ENST00000309546 ACVR2AP27037 513 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 HSD17B3P37058 310 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 ALDH9A1P49189 494 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 FBXW4P57775 412 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms