RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 PSPHP78330 225 aa16.69■□□□□ 0.26
SSSCA1-201ENST00000309328 FUT7Q11130 342 aa16.69■□□□□ 0.26
SSSCA1-201ENST00000309328 CHAF1BQ13112 559 aa16.69■□□□□ 0.26
SSSCA1-201ENST00000309328 ANXA8L1Q5VT79 327 aa16.69■□□□□ 0.26
SSSCA1-201ENST00000309328 C19orf48Q6RUI8 117 aa16.69■□□□□ 0.26
SSSCA1-201ENST00000309328 HSDL2Q6YN16 418 aa16.69■□□□□ 0.26
SSSCA1-201ENST00000309328 APCDD1LQ8NCL9 501 aa16.69■□□□□ 0.26
SSSCA1-201ENST00000309328 OR5L2Q8NGL0 311 aa16.69■□□□□ 0.26
SSSCA1-201ENST00000309328 TM9SF4Q92544 642 aa16.69■□□□□ 0.26
SSSCA1-201ENST00000309328 THOC3Q96J01 351 aaKnown RBP16.69■□□□□ 0.26
SSSCA1-201ENST00000309328 EBF4Q9BQW3 602 aa16.69■□□□□ 0.26
SSSCA1-201ENST00000309328 OR8D2Q9GZM6 311 aa16.69■□□□□ 0.26
SSSCA1-201ENST00000309328 CLMPQ9H6B4 373 aa16.69■□□□□ 0.26
SSSCA1-201ENST00000309328 KCNK13Q9HB14 408 aa16.69■□□□□ 0.26
SSSCA1-201ENST00000309328 A0A087WV62 115 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 GMNCA6NCL1 334 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 WASHC1A8K0Z3 465 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 A8MUA0 341 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 E9PBE3 544 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 PLOD2O00469 737 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 PLOD3O60568 738 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 SLC22A3O75751 556 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 ZFAND5O76080 213 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 DDAH2O95865 285 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 IGKV3-11P04433 115 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 IL6P05231 212 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 CCL11P51671 97 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 MANFP55145 182 aaKnown RBP16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 GNGT1P63211 74 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 SQLEQ14534 574 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 ZNF267Q14586 743 aaPredicted RBP16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 PRICKLE4Q2TBC4 344 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 H3F3CQ6NXT2 135 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 RNF111Q6ZNA4 994 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 CCDC116Q8IYX3 515 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 ARMC10Q8N2F6 343 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 LSM14AQ8ND56 463 aaKnown RBP16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 EXTL1Q92935 676 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 UCN3Q969E3 161 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 NCLNQ969V3 563 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 PPWD1Q96BP3 646 aaKnown RBP16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 CTHRC1Q96CG8 243 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 ZNF354BQ96LW1 612 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 AMDHD1Q96NU7 426 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 SLC25A23Q9BV35 468 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 DUSP26Q9BV47 211 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 CNPPD1Q9BV87 410 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 DEFB126Q9BYW3 111 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 ABI3Q9P2A4 366 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 PTGFRNQ9P2B2 879 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 PRODH2Q9UF12 536 aa16.68■□□□□ 0.26
SSSCA1-201ENST00000309328 DYTNA2CJ06 578 aa16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 RNASET2O00584 256 aaKnown RBP16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 PRAMEF2O60811 474 aa16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 COQ9O75208 318 aa16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 Q0VFX4 171 aa16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 ZNF628Q5EBL2 1059 aa16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 MSANTD1Q6ZTZ1 278 aa16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 SLC29A4Q7RTT9 530 aa16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 CPLX4Q7Z7G2 160 aa16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 KRTCAP2Q8N6L1 136 aa16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 C17orf47Q8NEP4 570 aa16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 OR7A2PQ8NGA2 310 aa16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 RFWD2Q8NHY2 731 aa16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 SUN3Q8TAQ9 357 aa16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 NUBPLQ8TB37 319 aa16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 ZNF721Q8TF20 911 aa16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 TTC9Q92623 222 aa16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 LMF1Q96S06 567 aa16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 SMAD5Q99717 465 aaKnown RBP16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 MESP1Q9BRJ9 268 aa16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 TMEM120AQ9BXJ8 343 aa16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 GLIPR2Q9H4G4 154 aa16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 FAM120CQ9NX05 1096 aaKnown RBP16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 MAT2BQ9NZL9 334 aa16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 ERVK-19Q9WJR5 959 aa16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 ZNF451Q9Y4E5 1061 aa16.67■□□□□ 0.26
SSSCA1-201ENST00000309328 MGAQ8IWI9 3026 aa16.66■□□□□ 0.26
SSSCA1-201ENST00000309328 TRBV11-1A0A0K0K1C0 115 aa16.66■□□□□ 0.26
SSSCA1-201ENST00000309328 FCHO1O14526 889 aa16.66■□□□□ 0.26
SSSCA1-201ENST00000309328 LAMP1P11279 417 aa16.66■□□□□ 0.26
SSSCA1-201ENST00000309328 S100A3P33764 101 aa16.66■□□□□ 0.26
SSSCA1-201ENST00000309328 GPC1P35052 558 aa16.66■□□□□ 0.26
SSSCA1-201ENST00000309328 KCNAB2Q13303 367 aa16.66■□□□□ 0.26
SSSCA1-201ENST00000309328 MEP1AQ16819 746 aa16.66■□□□□ 0.26
SSSCA1-201ENST00000309328 TMEM198Q66K66 360 aa16.66■□□□□ 0.26
SSSCA1-201ENST00000309328 TCTN3Q6NUS6 607 aa16.66■□□□□ 0.26
SSSCA1-201ENST00000309328 BHLHB9Q6PI77 547 aa16.66■□□□□ 0.26
SSSCA1-201ENST00000309328 ISLR2Q6UXK2 745 aa16.66■□□□□ 0.26
SSSCA1-201ENST00000309328 OR9A2Q8NGT5 310 aa16.66■□□□□ 0.26
SSSCA1-201ENST00000309328 PSMA8Q8TAA3 256 aa16.66■□□□□ 0.26
SSSCA1-201ENST00000309328 BRIX1Q8TDN6 353 aaKnown RBP16.66■□□□□ 0.26
SSSCA1-201ENST00000309328 OR5P2Q8WZ92 322 aa16.66■□□□□ 0.26
SSSCA1-201ENST00000309328 MOAP1Q96BY2 351 aa16.66■□□□□ 0.26
SSSCA1-201ENST00000309328 EPS8L2Q9H6S3 715 aa16.66■□□□□ 0.26
SSSCA1-201ENST00000309328 ZNF639Q9UID6 485 aa16.66■□□□□ 0.26
SSSCA1-201ENST00000309328 PCDHGB4Q9UN71 923 aa16.66■□□□□ 0.26
SSSCA1-201ENST00000309328 PRSS51A0A1B0GVH4 220 aa16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 A0A1W2PRB8 838 aa16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 FAM234BA2RU67 622 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms