RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 PRAP1Q96NZ9 151 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 DDA1Q9BW61 102 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 KLHL25Q9H0H3 589 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 SLC26A1Q9H2B4 701 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 TMBIM4Q9HC24 238 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 SSU72Q9NP77 194 aaKnown RBP7.8□□□□□ -1.16
CHD6-201ENST00000309279 ASCL3Q9NQ33 180 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 FGF21Q9NSA1 209 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 SH2B3Q9UQQ2 575 aa7.8□□□□□ -1.16
CHD6-201ENST00000309279 ACACAQ13085 2346 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 KCNE1BA0A087WTH5 132 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 WDR91A4D1P6 747 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 CCDC154A6NI56 674 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 A8MT66 165 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 G3V2L1 256 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 POLR1CO15160 346 aaPredicted RBP7.79□□□□□ -1.16
CHD6-201ENST00000309279 HCRTR1O43613 425 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 NRP2O60462 931 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 DLX3O60479 287 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 SRPX2O60687 465 aaPredicted RBP7.79□□□□□ -1.16
CHD6-201ENST00000309279 SMIM24O75264 130 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 AKR7A3O95154 331 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 CSTAP01040 98 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 PROCP04070 461 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 CYC1P08574 325 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 EZRP15311 586 aaKnown RBP7.79□□□□□ -1.16
CHD6-201ENST00000309279 PRKACAP17612 351 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 GNAZP19086 355 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 EPORP19235 508 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 TAC1P20366 129 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 GCH1P30793 250 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 SCTRP47872 440 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 CYP4F2P78329 520 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 CSNK1G2P78368 415 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 CYP4F3Q08477 520 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 PDK4Q16654 411 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 CLVS2Q5SYC1 327 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 DEPDC1Q5TB30 811 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 LINC00696Q6ZRV3 163 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 RNF44Q7L0R7 432 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 VASH2Q86V25 355 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 ZNF227Q86WZ6 799 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 NUDT13Q86X67 352 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.79□□□□□ -1.16
CHD6-201ENST00000309279 RDH11Q8TC12 318 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 KCNE4Q8WWG9 221 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 NXPE2Q96DL1 559 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 WDR34Q96EX3 536 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 ZNF285Q96NJ3 590 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 TEFMQ96QE5 360 aaKnown RBP7.79□□□□□ -1.16
CHD6-201ENST00000309279 OR2A5Q96R48 311 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 OR1F2PQ96R84 312 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 OR6C1Q96RD1 312 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 ABHD1Q96SE0 405 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 SPRY4Q9C004 299 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 APMAPQ9HDC9 416 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 TREM1Q9NP99 234 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 CENPMQ9NSP4 180 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 DDX28Q9NUL7 540 aaKnown RBP7.79□□□□□ -1.16
CHD6-201ENST00000309279 DNAJC11Q9NVH1 559 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 COPG2Q9UBF2 871 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 DKK4Q9UBT3 224 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 PISDQ9UG56 409 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 TUBD1Q9UJT1 453 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 ACSL6Q9UKU0 697 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 PLCL2Q9UPR0 1127 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 SPACA6W5XKT8 324 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 CFAP47Q6ZTR5 3102 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 SDK2Q58EX2 2172 aa7.79□□□□□ -1.16
CHD6-201ENST00000309279 A0A1W2PQ09 198 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 C5orf51A6NDU8 294 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 C9orf172C9J069 976 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 CCNT2O60583 730 aaKnown RBP7.78□□□□□ -1.16
CHD6-201ENST00000309279 PRAMEF4O60810 478 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 CDC123O75794 336 aaPredicted RBP7.78□□□□□ -1.16
CHD6-201ENST00000309279 WFS1O76024 890 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 TNFSF15O95150 251 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 SIX3O95343 332 aaPredicted RBP7.78□□□□□ -1.16
CHD6-201ENST00000309279 FESP07332 822 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 FHP07954 510 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 RPS17P08708 135 aaKnown RBP7.78□□□□□ -1.16
CHD6-201ENST00000309279 CDH1P12830 882 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 PTPN4P29074 926 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 ETV4P43268 484 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 CCR8P51685 355 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 BMXP51813 675 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 PRKAA2P54646 552 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 POLE2P56282 527 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 ERVPABLB-1P60509 514 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 HERVK_113P63132 956 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 FOXM1Q08050 763 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 TUBB3Q13509 450 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 GPR19Q15760 415 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 CATSPEREQ5SY80 951 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 DCAF12Q5T6F0 453 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 PRAMEF9Q5VWM5 478 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 ATG9BQ674R7 924 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 CEACAM20Q6UY09 585 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 ZNF813Q6ZN06 617 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 SLCO4C1Q6ZQN7 724 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms