RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 SMOXQ9NWM0 555 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 TRNAU1APQ9NX07 287 aaKnown RBP7.44□□□□□ -1.22
SCN9A-201ENST00000303354 SLC7A11Q9UPY5 501 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 LOC100130705A0A1B0GUX0 176 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 HTR3BO95264 441 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 B3GALT4O96024 378 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 PIGRP01833 764 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 PRKXP51817 358 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 SSTP61278 116 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 TMEM201Q5SNT2 666 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 IL17RCQ8NAC3 791 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 SEC14L1Q92503 715 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 SP140LQ9H930 580 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 SPO11Q9Y5K1 396 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 MROH1Q8NDA8 1641 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 PRSS38A1L453 326 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 PROM1O43490 865 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 CCNKO75909 580 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 MSL3P1P0C860 447 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 OR52R1Q8NGF1 315 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 GEMIN6Q8WXD5 167 aaKnown RBP7.44□□□□□ -1.22
SCN9A-201ENST00000303354 DEFB127Q9H1M4 99 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 FSCN3Q9NQT6 498 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 GPRC5BQ9NZH0 403 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 CLEC4EQ9ULY5 219 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 MAN2B2Q9Y2E5 1009 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 FXYD6-FXYD2A0A087WZ82 144 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 F11P03951 625 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 ZNF43P17038 809 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 SLC6A6P31641 620 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 ZNF763Q0D2J5 394 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 ARSKQ6UWY0 536 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 SHISA4Q96DD7 197 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 FXYD6Q9H0Q3 95 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 DNAJB9Q9UBS3 223 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 PRAMEF26H0Y7S4 382 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 DFNA5O60443 496 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 POU2F2P09086 479 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 KCNJ11Q14654 390 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 PLET1Q6UQ28 207 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 PARS2Q7L3T8 475 aaKnown RBP7.44□□□□□ -1.22
SCN9A-201ENST00000303354 P2RY8Q86VZ1 359 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 FBXL8Q96CD0 374 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 OR14J1Q9UGF5 321 aa7.44□□□□□ -1.22
SCN9A-201ENST00000303354 ZNF821O75541 412 aaPredicted RBP7.43□□□□□ -1.22
SCN9A-201ENST00000303354 CER1O95813 267 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 CD38P28907 300 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 APLNRP35414 380 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 CTXN1P60606 82 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 RPS15AP62244 130 aaKnown RBP7.43□□□□□ -1.22
SCN9A-201ENST00000303354 ALKBH6Q3KRA9 238 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 CFAP77Q6ZQR2 320 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 NPWQ8N729 165 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 OR52B6Q8NGF0 335 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 FAM117AQ9C073 453 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 DERL2Q9GZP9 239 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 MS4A12Q9NXJ0 267 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 OARD1Q9Y530 152 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 RLN2P04090 185 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 RPS5P46782 204 aaKnown RBP7.43□□□□□ -1.22
SCN9A-201ENST00000303354 FXNQ16595 210 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 TDHQ8IZJ6 230 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 C2CD4AQ8NCU7 369 aaPredicted RBP7.43□□□□□ -1.22
SCN9A-201ENST00000303354 OR56A1Q8NGH5 318 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 SHKBP1Q8TBC3 707 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 SMOC1Q9H4F8 434 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 PPP1R14DQ9NXH3 145 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 PRODH2Q9UF12 536 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 MGAT4BQ9UQ53 548 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 POMPQ9Y244 141 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 ADAM18Q9Y3Q7 739 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 PRKRAO75569 313 aaKnown RBP7.43□□□□□ -1.22
SCN9A-201ENST00000303354 EDN1P05305 212 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 TNFRSF8P28908 595 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 MALLQ13021 153 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 C3orf33Q6P1S2 294 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 ZER1Q7Z7L7 766 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 FAM217AQ8IXS0 508 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 IQCF1Q8N6M8 205 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 TMEM234Q8WY98 164 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 CENPNQ96H22 339 aaPredicted RBP7.43□□□□□ -1.22
SCN9A-201ENST00000303354 CAMK1GQ96NX5 476 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 PKP2Q99959 881 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 THUMPD1Q9NXG2 353 aaKnown RBP7.43□□□□□ -1.22
SCN9A-201ENST00000303354 DPPA5A6NC42 116 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 TTLL8A6PVC2 850 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 PRKNO60260 465 aaPredicted RBP7.43□□□□□ -1.22
SCN9A-201ENST00000303354 RGS19P49795 217 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 RORCP51449 518 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 ANKDD1AQ495B1 522 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 SLC39A11Q8N1S5 342 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 INPP5KQ9BT40 448 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 ZNF471Q9BX82 626 aaPredicted RBP7.43□□□□□ -1.22
SCN9A-201ENST00000303354 C14orf166Q9Y224 244 aaKnown RBP7.43□□□□□ -1.22
SCN9A-201ENST00000303354 ARGFXA6NJG6 315 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 ERCC1P07992 297 aaPredicted RBP7.43□□□□□ -1.22
SCN9A-201ENST00000303354 RNH1P13489 461 aaKnown RBP7.43□□□□□ -1.22
SCN9A-201ENST00000303354 RFC3P40938 356 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 MAGEA3P43357 314 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 TM4SF4P48230 202 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms