RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 IMP4Q96G21 291 aaKnown RBP12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 MTG2Q9H4K7 406 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PCDHB3Q9Y5E6 796 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 LTN1O94822 1766 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TYROBPO43914 113 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 RAD51DO75771 328 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 RGS9O75916 674 aaPredicted RBP12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SLC35E2BP0CK96 405 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 IL1RNP18510 177 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ZNF84P51523 738 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 MOGSQ13724 837 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 MOGQ16653 247 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 AMIGO3Q86WK7 504 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 IL22RA1Q8N6P7 574 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PITX2Q99697 317 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 G6PC3Q9BUM1 346 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 RXFP3Q9NSD7 469 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 GPRC5BQ9NZH0 403 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 NFS1Q9Y697 457 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TVP23AA6NH52 213 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 GPR32O75388 356 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 MT-ND2P03891 347 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 NPR2P20594 1047 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SLC2A5P22732 501 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 KCNC3Q14003 757 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 CATSPEREQ5SY80 951 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 HMBOX1Q6NT76 420 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ZFAND4Q86XD8 727 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TTC9BQ8N6N2 239 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PSD4Q8NDX1 1056 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ZUFSPQ96AP4 578 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PHOX2BQ99453 314 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 MACROD1Q9BQ69 325 aa12.97□□□□□ -0.33
CHRFAM7A-201ENST00000299847 C3P01024 1663 aa12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PCDH17O14917 1159 aa12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 C6P13671 934 aa12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 CD70P32970 193 aa12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 HES5Q5TA89 166 aa12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PLBD1Q6P4A8 553 aa12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TIGD4Q8IY51 512 aa12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ZNF100Q8IYN0 542 aa12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 OR4C15Q8NGM1 316 aa12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 MFSD8Q8NHS3 518 aa12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TMEM121BQ9BXQ6 578 aaPredicted RBP12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 MROQ9BYG7 248 aa12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 FAAHO00519 579 aa12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 EMC8O43402 210 aa12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SNRPD2P62316 118 aaKnown RBP12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 DPCDQ9BVM2 203 aaPredicted RBP12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 DEFB126Q9BYW3 111 aa12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SLC39A1Q9NY26 324 aa12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ACSL5Q9ULC5 683 aa12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 CICQ96RK0 1608 aaPredicted RBP12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SCAMP2O15127 329 aaKnown RBP12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 GSTT2P0CG29 244 aa12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SIAH1Q8IUQ4 282 aa12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 MAFIPQ8WZ33 124 aa12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 LRR1Q96L50 414 aa12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TMEM68Q96MH6 324 aa12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TREX2Q9BQ50 279 aaPredicted RBP12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 RPH3AQ9Y2J0 694 aaPredicted RBP12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 IRS2Q9Y4H2 1338 aa12.96□□□□□ -0.33
CHRFAM7A-201ENST00000299847 COL1A1P02452 1464 aaPredicted RBP12.96□□□□□ -0.34
CHRFAM7A-201ENST00000299847 VSTM5A8MXK1 200 aa12.96□□□□□ -0.34
CHRFAM7A-201ENST00000299847 OR2B3O76000 313 aa12.96□□□□□ -0.34
CHRFAM7A-201ENST00000299847 DCDC5Q6ZRR9 648 aa12.96□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SHISA6Q6ZSJ9 500 aa12.96□□□□□ -0.34
CHRFAM7A-201ENST00000299847 WDR92Q96MX6 357 aa12.96□□□□□ -0.34
CHRFAM7A-201ENST00000299847 HINT2Q9BX68 163 aa12.96□□□□□ -0.34
CHRFAM7A-201ENST00000299847 FBRSQ9HAH7 460 aa12.96□□□□□ -0.34
CHRFAM7A-201ENST00000299847 FZD9O00144 591 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 PPM1BO75688 479 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 CD3GP09693 182 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 GGT2P36268 569 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ATP4BP51164 291 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 VMACQ2NL98 169 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 PIGGQ5H8A4 983 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SORBS1Q9BX66 1292 aaKnown RBP12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SLC7A11Q9UPY5 501 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 BACE2Q9Y5Z0 518 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 NPIPA5A0A0B4J1W7 369 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 NPIPA7E9PJI5 369 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 OPN1LWP04000 364 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 NPIPA8P0DM63 369 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 TUBA3CQ13748 450 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 MFSD13AQ14CX5 517 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 NXPE4Q6UWF7 544 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ELMOD2Q8IZ81 293 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 SEC14L4Q9UDX3 406 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 APOBEC3BQ9UH17 382 aaKnown RBP12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 RBBP9O75884 186 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 STC2O76061 302 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 BMP1P13497 986 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 NIPAL4Q0D2K0 466 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 ZER1Q7Z7L7 766 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 HS3ST5Q8IZT8 346 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 S100PBPQ96BU1 408 aa12.95□□□□□ -0.34
CHRFAM7A-201ENST00000299847 UHRF1Q96T88 793 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms