RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 ZNF763Q0D2J5 394 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 CMPK2Q5EBM0 449 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 FKBP1CQ5VVH2 108 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 SHFQ7M4L6 423 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 PRSS48Q7RTY5 328 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 GPR149Q86SP6 731 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 ZFP90Q8TF47 636 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 SUV39H2Q9H5I1 410 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 B3GAT2Q9NPZ5 323 aa14.24□□□□□ -0.13
SCN3B-201ENST00000299333 LSM5Q9Y4Y9 91 aaKnown RBP14.24□□□□□ -0.13
SCN3B-201ENST00000299333 MAGEB4O15481 346 aaPredicted RBP14.23□□□□□ -0.13
SCN3B-201ENST00000299333 CLDN7O95471 211 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 ALPPL2P10696 532 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 GJA5P36382 358 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 ERVK-21P61565 698 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 BCL2A1Q16548 175 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 CDCA2Q69YH5 1023 aaPredicted RBP14.23□□□□□ -0.13
SCN3B-201ENST00000299333 TANGO2Q6ICL3 276 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 C2CD4AQ8NCU7 369 aaPredicted RBP14.23□□□□□ -0.13
SCN3B-201ENST00000299333 TRMT10AQ8TBZ6 339 aaKnown RBP14.23□□□□□ -0.13
SCN3B-201ENST00000299333 ZNF516Q92618 1163 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 SIGLEC10Q96LC7 697 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 CMKLR1Q99788 373 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 ARPC5LQ9BPX5 153 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 REV1Q9UBZ9 1251 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 PLAGL1Q9UM63 463 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 SLIT3O75094 1523 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 RPS10-NUDT3A0A1W2PQS6 291 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 SLC38A8A6NNN8 435 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 RPS10P46783 165 aaKnown RBP14.23□□□□□ -0.13
SCN3B-201ENST00000299333 GCGRP47871 477 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 OGDHQ02218 1023 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 TDGQ13569 410 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 AGTRAPQ6RW13 159 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 GTF2H5Q6ZYL4 71 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 OR13C3Q8NGS6 347 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 SLC22A18Q96BI1 424 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 SH3YL1Q96HL8 342 aaPredicted RBP14.23□□□□□ -0.13
SCN3B-201ENST00000299333 URM1Q9BTM9 101 aaKnown RBP14.23□□□□□ -0.13
SCN3B-201ENST00000299333 KCNJ16Q9NPI9 418 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 PCDHB11Q9Y5F2 797 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 CDK4P11802 303 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 ACTR1BP42025 376 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 STC1P52823 247 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 ACTR1AP61163 376 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 SLC10A6Q3KNW5 377 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 CES4AQ5XG92 561 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 GTF2H4Q92759 462 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 DNAJA3Q96EY1 480 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 MFFQ9GZY8 342 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 SYNPO2LQ9H987 977 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 WASH6PQ9NQA3 447 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 BCL9O00512 1426 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 MAOAP21397 527 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 CLCNKAP51800 687 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 PTPRCAPQ14761 206 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 HERVK_113Q902F9 699 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 MRIQ9BWK5 157 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 PLEKHA3Q9HB20 300 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 COQ4Q9Y3A0 265 aa14.23□□□□□ -0.13
SCN3B-201ENST00000299333 A8MU76 341 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 NR2C1P13056 603 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 KDELR2P33947 212 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 ID2Q02363 134 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 ITPRIPL2Q3MIP1 535 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 ARSIQ5FYB1 569 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 CNIH2Q6PI25 160 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 KCTD18Q6PI47 426 aaPredicted RBP14.22□□□□□ -0.13
SCN3B-201ENST00000299333 C3P1Q6ZMU1 363 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 CLEC20AQ6ZU45 233 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 PADI3Q9ULW8 664 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 LOC105369274A0A096LPK9 316 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 EEDO75530 441 aaKnown RBP14.22□□□□□ -0.13
SCN3B-201ENST00000299333 BEST1O76090 585 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 TAGLNQ01995 201 aaKnown RBP14.22□□□□□ -0.13
SCN3B-201ENST00000299333 MEF2AQ02078 507 aaPredicted RBP14.22□□□□□ -0.13
SCN3B-201ENST00000299333 PCGF3Q3KNV8 242 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 METTL11BQ5VVY1 283 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 OR4N4Q8N0Y3 316 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 PAQR8Q8TEZ7 354 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 ABI3Q9P2A4 366 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 NOX1Q9Y5S8 564 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 B3GALT1Q9Y5Z6 326 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 HSPE1-MOB4S4R3N1 261 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 SOX30O94993 753 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 CNOT4O95628 575 aaKnown RBP14.22□□□□□ -0.13
SCN3B-201ENST00000299333 ACVRL1P37023 503 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 CLRN1P58418 232 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 TMEM41BQ5BJD5 291 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 NOXRED1Q6NXP6 359 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 LRFN4Q6PJG9 635 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 SUSD1Q6UWL2 747 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 CAMKVQ8NCB2 501 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 FAM83FQ8NEG4 500 aaPredicted RBP14.22□□□□□ -0.13
SCN3B-201ENST00000299333 BBS10Q8TAM1 723 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 CHPT1Q8WUD6 406 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 FAM46BQ96A09 425 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 ANKMY1Q9P2S6 941 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 CACNG2Q9Y698 323 aa14.22□□□□□ -0.13
SCN3B-201ENST00000299333 B4GALT2O60909 372 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms