RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 MC3RP41968 323 aa23.07■■□□□ 1.28
GTF2A1-201ENST00000298173 DCDP81605 110 aaKnown RBP23.07■■□□□ 1.28
GTF2A1-201ENST00000298173 BIKQ13323 160 aa23.07■■□□□ 1.28
GTF2A1-201ENST00000298173 PRICKLE4Q2TBC4 344 aa23.07■■□□□ 1.28
GTF2A1-201ENST00000298173 NKAIN1Q4KMZ8 207 aa23.07■■□□□ 1.28
GTF2A1-201ENST00000298173 VWA2Q5GFL6 755 aa23.07■■□□□ 1.28
GTF2A1-201ENST00000298173 LCN8Q6JVE9 175 aa23.07■■□□□ 1.28
GTF2A1-201ENST00000298173 DHFR2Q86XF0 187 aa23.07■■□□□ 1.28
GTF2A1-201ENST00000298173 MICU2Q8IYU8 434 aa23.07■■□□□ 1.28
GTF2A1-201ENST00000298173 ST13P4Q8IZP2 240 aaPredicted RBP23.07■■□□□ 1.28
GTF2A1-201ENST00000298173 TNIP2Q8NFZ5 429 aa23.07■■□□□ 1.28
GTF2A1-201ENST00000298173 OR7G2Q8NG99 324 aa23.07■■□□□ 1.28
GTF2A1-201ENST00000298173 KAT2AQ92830 837 aa23.07■■□□□ 1.28
GTF2A1-201ENST00000298173 PMEPA1Q969W9 287 aa23.07■■□□□ 1.28
GTF2A1-201ENST00000298173 CTHRC1Q96CG8 243 aa23.07■■□□□ 1.28
GTF2A1-201ENST00000298173 YIPF2Q9BWQ6 316 aa23.07■■□□□ 1.28
GTF2A1-201ENST00000298173 ZCCHC3Q9NUD5 404 aaKnown RBP23.07■■□□□ 1.28
GTF2A1-201ENST00000298173 SLC39A1Q9NY26 324 aa23.07■■□□□ 1.28
GTF2A1-201ENST00000298173 SNX13Q9Y5W8 968 aa23.07■■□□□ 1.28
GTF2A1-201ENST00000298173 ZFHX2Q9C0A1 2572 aaPredicted RBP23.07■■□□□ 1.28
GTF2A1-201ENST00000298173 UPK1AO00322 258 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 DLL1O00548 723 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 ARPC2O15144 300 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 CSO75390 466 aaKnown RBP23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 SLITRK5O94991 958 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 ZNF28P17035 718 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 GGT1P19440 569 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 STX4Q12846 297 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 SPDYE7PQ495Y7 208 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 QSOX2Q6ZRP7 698 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 RAB11FIP2Q7L804 512 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 ZZZ3Q8IYH5 903 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 OR2L13Q8N349 312 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 BHLHE22Q8NFJ8 381 aaPredicted RBP23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 RNF31Q96EP0 1072 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 LRFN5Q96NI6 719 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 C3orf14Q9HBI5 128 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 NECTIN3Q9NQS3 549 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 BCAP29Q9UHQ4 241 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 IGKV3D-11A0A0A0MRZ8 115 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 CPNE3O75131 537 aaKnown RBP23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 NUDT7P0C024 238 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 ETFAP13804 333 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 ITIH1P19827 911 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 MAOAP21397 527 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 SOX11P35716 441 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 CRATP43155 626 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 EFNA3P52797 238 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 CASP9P55211 416 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 MRPS35P82673 323 aaKnown RBP23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 FHL5Q5TD97 284 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 GLYATQ6IB77 296 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 DGAT2L6Q6ZPD8 337 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 PROSER1Q86XN7 944 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 OR56A1Q8NGH5 318 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 PPWD1Q96BP3 646 aaKnown RBP23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 GORASP2Q9H8Y8 452 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 MAT2BQ9NZL9 334 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 PTGFRNQ9P2B2 879 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 RAPGEFL1Q9UHV5 662 aa23.06■■□□□ 1.28
GTF2A1-201ENST00000298173 KNTC1P50748 2209 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 GIMAP1-GIMAP5A0A087WTJ2 511 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 A0A087WV62 115 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 MEN1O00255 615 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 PLOD3O60568 738 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 NCK1P16333 377 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 ATP6V1B2P21281 511 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 CSRP1P21291 193 aaKnown RBP23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 ETV5P41161 510 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 MAGEA8P43361 318 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 PRR5P85299 388 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 RHAGQ02094 409 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 MAP4K2Q12851 820 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 CYP51A1Q16850 503 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 VMACQ2NL98 169 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 ERICH5Q6P6B1 374 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 BHLHB9Q6PI77 547 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 FAM111BQ6SJ93 734 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 ANGPTL8Q6UXH0 198 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 JADE3Q92613 823 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 GIMAP5Q96F15 307 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 DEPDC7Q96QD5 511 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 SERHL2Q9H4I8 314 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 TMEM38AQ9H6F2 299 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 ANKRA2Q9H9E1 313 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 MAGEL2Q9UJ55 1249 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 CCDC88CQ9P219 2028 aa23.05■■□□□ 1.28
GTF2A1-201ENST00000298173 RECKO95980 971 aa23.04■■□□□ 1.28
GTF2A1-201ENST00000298173 NT5EP21589 574 aa23.04■■□□□ 1.28
GTF2A1-201ENST00000298173 GALNSP34059 522 aa23.04■■□□□ 1.28
GTF2A1-201ENST00000298173 STT3AP46977 705 aa23.04■■□□□ 1.28
GTF2A1-201ENST00000298173 ERFP50548 548 aa23.04■■□□□ 1.28
GTF2A1-201ENST00000298173 TP53BP2Q13625 1128 aa23.04■■□□□ 1.28
GTF2A1-201ENST00000298173 SERTAD2Q14140 314 aa23.04■■□□□ 1.28
GTF2A1-201ENST00000298173 TRMT12Q53H54 448 aaKnown RBP23.04■■□□□ 1.28
GTF2A1-201ENST00000298173 HES3Q5TGS1 186 aa23.04■■□□□ 1.28
GTF2A1-201ENST00000298173 CEACAM20Q6UY09 585 aa23.04■■□□□ 1.28
GTF2A1-201ENST00000298173 CYP2R1Q6VVX0 501 aa23.04■■□□□ 1.28
GTF2A1-201ENST00000298173 OVCH1Q7RTY7 1134 aa23.04■■□□□ 1.28
GTF2A1-201ENST00000298173 LAPTM4BQ86VI4 370 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms