RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 OR5P2Q8WZ92 322 aa23.08■■□□□ 1.29
SPTSSA-201ENST00000298130 PIK3R3Q92569 461 aa23.08■■□□□ 1.29
SPTSSA-201ENST00000298130 MTERF3Q96E29 417 aa23.08■■□□□ 1.29
SPTSSA-201ENST00000298130 C17orf62Q9BQA9 187 aa23.08■■□□□ 1.29
SPTSSA-201ENST00000298130 PLA2G12AQ9BZM1 189 aa23.08■■□□□ 1.29
SPTSSA-201ENST00000298130 EGLN3Q9H6Z9 239 aa23.08■■□□□ 1.29
SPTSSA-201ENST00000298130 DYRK4Q9NR20 520 aa23.08■■□□□ 1.29
SPTSSA-201ENST00000298130 DKK3Q9UBP4 350 aa23.08■■□□□ 1.29
SPTSSA-201ENST00000298130 KLHL3Q9UH77 587 aa23.08■■□□□ 1.29
SPTSSA-201ENST00000298130 TBX21Q9UL17 535 aa23.08■■□□□ 1.29
SPTSSA-201ENST00000298130 A4GNTQ9UNA3 340 aa23.08■■□□□ 1.29
SPTSSA-201ENST00000298130 OTOL1A6NHN0 477 aaPredicted RBP23.08■■□□□ 1.29
SPTSSA-201ENST00000298130 CSF2P04141 144 aa23.08■■□□□ 1.29
SPTSSA-201ENST00000298130 CD79BP40259 229 aa23.08■■□□□ 1.29
SPTSSA-201ENST00000298130 GSTM5P46439 218 aa23.08■■□□□ 1.29
SPTSSA-201ENST00000298130 HNRNPA0Q13151 305 aaKnown RBP23.08■■□□□ 1.29
SPTSSA-201ENST00000298130 TCEA2Q15560 299 aa23.08■■□□□ 1.29
SPTSSA-201ENST00000298130 CAMKK1Q8N5S9 505 aa23.08■■□□□ 1.29
SPTSSA-201ENST00000298130 FBXO15Q8NCQ5 510 aaPredicted RBP23.08■■□□□ 1.29
SPTSSA-201ENST00000298130 KLK6Q92876 244 aa23.08■■□□□ 1.29
SPTSSA-201ENST00000298130 RAD51AP1Q96B01 352 aa23.08■■□□□ 1.29
SPTSSA-201ENST00000298130 TM9SF2Q99805 663 aa23.08■■□□□ 1.29
SPTSSA-201ENST00000298130 CRNNQ9UBG3 495 aaPredicted RBP23.08■■□□□ 1.29
SPTSSA-201ENST00000298130 A0A1W2PQ09 198 aa23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 ERAL1O75616 437 aaKnown RBP23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 KRT8P05787 483 aa23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 EPHX1P07099 455 aa23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 BUD31P41223 144 aaPredicted RBP23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 OR6T1Q8NGN1 323 aa23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 GATAD2BQ8WXI9 593 aa23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 ZNF354BQ96LW1 612 aa23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 MS4A8Q9BY19 250 aa23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 FZD3Q9NPG1 666 aa23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 N6AMT1Q9Y5N5 214 aa23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 SPIN1Q9Y657 262 aaPredicted RBP23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 LRRK1Q38SD2 2015 aa23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 CAPN5O15484 640 aaPredicted RBP23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 PCCBP05166 539 aa23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 EPCAMP16422 314 aa23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 RORCP51449 518 aa23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 RHAGQ02094 409 aa23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 ARHGAP15Q53QZ3 475 aa23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 CLEC12AQ5QGZ9 265 aa23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 ATAD3CQ5T2N8 411 aa23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 NANOGP1Q8N7R0 232 aa23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 OR4K5Q8NGD3 323 aa23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 OR2L2Q8NH16 312 aa23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 ZCCHC2Q9C0B9 1178 aaKnown RBP23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 A4GALTQ9NPC4 353 aa23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 ENOPH1Q9UHY7 261 aa23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 ICKQ9UPZ9 632 aa23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 MGAT4BQ9UQ53 548 aa23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 DNMT3AQ9Y6K1 912 aaPredicted RBP23.07■■□□□ 1.28
SPTSSA-201ENST00000298130 CEBPBP17676 345 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 PTPN2P17706 415 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 PPM1AP35813 382 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 HTR3AP46098 478 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 SNRPGP62308 76 aaKnown RBP23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 HOXC5Q00444 222 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 C12orf73Q69YU5 71 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 ABI3BPQ7Z7G0 1075 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 RACGAP1Q9H0H5 632 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 MALT1Q9UDY8 824 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 CISD3P0C7P0 127 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 ETV6P41212 452 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 MFSD4BQ5TF39 518 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 FAM131AQ6UXB0 335 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 IKBIPQ70UQ0 350 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 KIAA0907Q7Z7F0 614 aaPredicted RBP23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 NRSN1Q8IZ57 195 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 OR52I1Q8NGK6 324 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 UBE2E3Q969T4 207 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 EFHD2Q96C19 240 aaPredicted RBP23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 MND1Q9BWT6 205 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 ZCCHC3Q9NUD5 404 aaKnown RBP23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 AHSPQ9NZD4 102 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 STUB1Q9UNE7 303 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 RPL36Q9Y3U8 105 aaKnown RBP23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 MTCL1Q9Y4B5 1905 aaKnown RBP23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 CXorf51AA0A1B0GTR3 108 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 ABHD14A-ACY1A0A1B0GW23 586 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 FAAHO00519 579 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 EPPINO95925 133 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 CH25HO95992 272 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 IL7P13232 177 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 ADRB3P13945 408 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 RACK1P63244 317 aaKnown RBP23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 SLAMF1Q13291 335 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 OR8J1Q8NGP2 316 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 FNDC11Q9BVV2 318 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 IL20RAQ9UHF4 553 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 KCNE3Q9Y6H6 103 aa23.06■■□□□ 1.28
SPTSSA-201ENST00000298130 KIAA1671Q9BY89 1806 aa23.05■■□□□ 1.28
SPTSSA-201ENST00000298130 DOCK9Q9BZ29 2069 aa23.05■■□□□ 1.28
SPTSSA-201ENST00000298130 PCBP4P57723 403 aaKnown RBP23.05■■□□□ 1.28
SPTSSA-201ENST00000298130 SNAPC1Q16533 368 aa23.05■■□□□ 1.28
SPTSSA-201ENST00000298130 SYT14P1Q58G82 188 aa23.05■■□□□ 1.28
SPTSSA-201ENST00000298130 UBE3DQ7Z6J8 389 aa23.05■■□□□ 1.28
SPTSSA-201ENST00000298130 OR6F1Q8NGZ6 308 aa23.05■■□□□ 1.28
SPTSSA-201ENST00000298130 SLC9A6Q92581 669 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms